6 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_04294	RNA-dependent RNA polymerase. (1300 aa)
	PV10_08796	RNA-dependent RNA polymerase. (1375 aa)
	PV10_05059	RNA-dependent RNA polymerase. (1230 aa)
	B0A52_02609	S1 domain-containing protein. (169 aa)
	B0A52_01817	RPOL4c domain-containing protein. (152 aa)
	B0A52_01643	Uncharacterized protein. (152 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01643	B0A52_01817	A0A0D1Z529	A0A0D1Z4K7	Uncharacterized protein.	RPOL4c domain-containing protein.	0.999
B0A52_01643	B0A52_02609	A0A0D1Z529	A0A0D1XUD0	Uncharacterized protein.	S1 domain-containing protein.	0.999
B0A52_01817	B0A52_01643	A0A0D1Z4K7	A0A0D1Z529	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999
B0A52_01817	B0A52_02609	A0A0D1Z4K7	A0A0D1XUD0	RPOL4c domain-containing protein.	S1 domain-containing protein.	0.999
B0A52_02609	B0A52_01643	A0A0D1XUD0	A0A0D1Z529	S1 domain-containing protein.	Uncharacterized protein.	0.999
B0A52_02609	B0A52_01817	A0A0D1XUD0	A0A0D1Z4K7	S1 domain-containing protein.	RPOL4c domain-containing protein.	0.999