20 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_05633	RNA_pol_L_2 domain-containing protein. (129 aa)
	PV10_03370	RPA43_OB domain-containing protein. (475 aa)
	PV10_07591	RPOLD domain-containing protein. (373 aa)
	PV10_06381	DNA-directed RNA polymerase. (196 aa)
	PV10_05064	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1427 aa)
	PV10_00523	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (530 aa)
	PV10_07753	DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (507 aa)
	PV10_07867	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (693 aa)
	PV10_03511	Uncharacterized protein. (453 aa)
	PV10_03603	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1262 aa)
	B0A52_01643	Uncharacterized protein. (152 aa)
	PV10_06445	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1218 aa)
	PV10_04098	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1222 aa)
	PV10_04961	RPOLD domain-containing protein. (337 aa)
	B0A52_09440	Uncharacterized protein. (238 aa)
	PV10_03006	RNA_pol_L_2 domain-containing protein. (122 aa)
	PV10_02682	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1742 aa)
	PV10_03478	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1761 aa)
	PV10_00204	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1591 aa)
	PV10_05062	Uncharacterized protein. (363 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01643	B0A52_09440	A0A0D1Z529	A0A0D1ZJS0	Uncharacterized protein.	Uncharacterized protein.	0.999
B0A52_01643	PV10_00204	A0A0D1Z529	A0A0D1ZNV4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_01643	PV10_02682	A0A0D1Z529	A0A0D1ZM22	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_01643	PV10_03006	A0A0D1Z529	A0A0D1ZL15	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
B0A52_01643	PV10_03370	A0A0D1Z529	A0A0D1ZP40	Uncharacterized protein.	RPA43_OB domain-containing protein.	0.999
B0A52_01643	PV10_03478	A0A0D1Z529	A0A0D1ZMK2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_01643	PV10_03511	A0A0D1Z529	A0A0D1Y5E8	Uncharacterized protein.	Uncharacterized protein.	0.993
B0A52_01643	PV10_03603	A0A0D1Z529	A0A0D1Y5W5	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_01643	PV10_04098	A0A0D1Z529	A0A0D1ZG60	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_01643	PV10_04961	A0A0D1Z529	A0A0D1ZGG2	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
B0A52_01643	PV10_05062	A0A0D1Z529	A0A0D2A4I4	Uncharacterized protein.	Uncharacterized protein.	0.992
B0A52_01643	PV10_05633	A0A0D1Z529	A0A0D1ZWA0	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
B0A52_01643	PV10_06381	A0A0D1Z529	A0A0D1WRU2	Uncharacterized protein.	DNA-directed RNA polymerase.	0.997
B0A52_01643	PV10_06445	A0A0D1Z529	A0A0D1ZDF4	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_01643	PV10_07591	A0A0D1Z529	A0A0D1WMM2	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
B0A52_09440	B0A52_01643	A0A0D1ZJS0	A0A0D1Z529	Uncharacterized protein.	Uncharacterized protein.	0.999
B0A52_09440	PV10_00204	A0A0D1ZJS0	A0A0D1ZNV4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_09440	PV10_02682	A0A0D1ZJS0	A0A0D1ZM22	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_09440	PV10_03006	A0A0D1ZJS0	A0A0D1ZL15	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
B0A52_09440	PV10_03370	A0A0D1ZJS0	A0A0D1ZP40	Uncharacterized protein.	RPA43_OB domain-containing protein.	0.999