13 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_04135	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (567 aa)
	PV10_07591	RPOLD domain-containing protein. (373 aa)
	PV10_05438	Uncharacterized protein. (348 aa)
	PV10_06381	DNA-directed RNA polymerase. (196 aa)
	PV10_08779	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
	PV10_05062	Uncharacterized protein. (363 aa)
	PV10_05633	RNA_pol_L_2 domain-containing protein. (129 aa)
	PV10_00204	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1591 aa)
	B0A52_09440	Uncharacterized protein. (238 aa)
	B0A52_01643	Uncharacterized protein. (152 aa)
	PV10_03511	Uncharacterized protein. (453 aa)
	PV10_04587	Uncharacterized protein. (567 aa)
	PV10_05370	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (297 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01643	B0A52_09440	A0A0D1Z529	A0A0D1ZJS0	Uncharacterized protein.	Uncharacterized protein.	0.999
B0A52_01643	PV10_00204	A0A0D1Z529	A0A0D1ZNV4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_01643	PV10_03511	A0A0D1Z529	A0A0D1Y5E8	Uncharacterized protein.	Uncharacterized protein.	0.993
B0A52_01643	PV10_04135	A0A0D1Z529	A0A0D1XXB2	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
B0A52_01643	PV10_04587	A0A0D1Z529	A0A0D1XYQ2	Uncharacterized protein.	Uncharacterized protein.	0.993
B0A52_01643	PV10_05062	A0A0D1Z529	A0A0D2A4I4	Uncharacterized protein.	Uncharacterized protein.	0.992
B0A52_01643	PV10_05370	A0A0D1Z529	A0A0D1XRL2	Uncharacterized protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.960
B0A52_01643	PV10_05438	A0A0D1Z529	A0A0D1WP42	Uncharacterized protein.	Uncharacterized protein.	0.959
B0A52_01643	PV10_05633	A0A0D1Z529	A0A0D1ZWA0	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
B0A52_01643	PV10_06381	A0A0D1Z529	A0A0D1WRU2	Uncharacterized protein.	DNA-directed RNA polymerase.	0.997
B0A52_01643	PV10_07591	A0A0D1Z529	A0A0D1WMM2	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
B0A52_01643	PV10_08779	A0A0D1Z529	A0A0D1XLZ3	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
B0A52_09440	B0A52_01643	A0A0D1ZJS0	A0A0D1Z529	Uncharacterized protein.	Uncharacterized protein.	0.999
B0A52_09440	PV10_00204	A0A0D1ZJS0	A0A0D1ZNV4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_09440	PV10_03511	A0A0D1ZJS0	A0A0D1Y5E8	Uncharacterized protein.	Uncharacterized protein.	0.998
B0A52_09440	PV10_04135	A0A0D1ZJS0	A0A0D1XXB2	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
B0A52_09440	PV10_04587	A0A0D1ZJS0	A0A0D1XYQ2	Uncharacterized protein.	Uncharacterized protein.	0.996
B0A52_09440	PV10_05062	A0A0D1ZJS0	A0A0D2A4I4	Uncharacterized protein.	Uncharacterized protein.	0.996
B0A52_09440	PV10_05370	A0A0D1ZJS0	A0A0D1XRL2	Uncharacterized protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.992
B0A52_09440	PV10_05438	A0A0D1ZJS0	A0A0D1WP42	Uncharacterized protein.	Uncharacterized protein.	0.967