STRINGSTRING
PV10_01601 PV10_01601 PV10_08841 PV10_08841 B0A52_05764 B0A52_05764 PV10_06985 PV10_06985 PV10_00080 PV10_00080 B0A52_07467 B0A52_07467 PV10_00806 PV10_00806 PV10_00388 PV10_00388 PV10_00663 PV10_00663 PV10_00033 PV10_00033 B0A52_08313 B0A52_08313 PV10_01045 PV10_01045 PV10_01196 PV10_01196 PV10_06117 PV10_06117 PV10_04069 PV10_04069 PV10_06838 PV10_06838 PV10_06920 PV10_06920 PV10_04936 PV10_04936 PV10_05032 PV10_05032 PV10_04777 PV10_04777 PV10_04433 PV10_04433 PV10_04147 PV10_04147 B0A52_02609 B0A52_02609 PV10_06236 PV10_06236 PV10_05972 PV10_05972 PV10_05370 PV10_05370 B0A52_01899 B0A52_01899 PV10_08605 PV10_08605 PV10_01121 PV10_01121 PV10_03752 PV10_03752 PV10_03730 PV10_03730 PV10_06482 PV10_06482 PV10_06381 PV10_06381 PV10_01598 PV10_01598 B0A52_06028 B0A52_06028 PV10_01046 PV10_01046 PV10_00205 PV10_00205 PV10_05871 PV10_05871 PV10_03389 PV10_03389 PV10_03370 PV10_03370 PV10_03205 PV10_03205 PV10_02872 PV10_02872 PV10_02711 PV10_02711 PV10_02312 PV10_02312 PV10_04759 PV10_04759 PV10_03751 PV10_03751 PV10_04282 PV10_04282 PV10_06736 PV10_06736 PV10_06445 PV10_06445 PV10_04003 PV10_04003 PV10_06375 PV10_06375 PV10_06302 PV10_06302 PV10_06724 PV10_06724 PV10_07636 PV10_07636 PV10_08543 PV10_08543 B0A52_01817 B0A52_01817 PV10_08396 PV10_08396
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_01601Uncharacterized protein. (569 aa)
PV10_08841Myb_DNA-bind_7 domain-containing protein. (662 aa)
B0A52_05764Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PV10_06985Uncharacterized protein. (360 aa)
PV10_00080Zn(2)-C6 fungal-type domain-containing protein. (615 aa)
B0A52_07467TFIIB-type domain-containing protein. (361 aa)
PV10_00806Uncharacterized protein. (936 aa)
PV10_00388Uncharacterized protein. (78 aa)
PV10_00663Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (706 aa)
PV10_00033Uncharacterized protein. (608 aa)
B0A52_08313HMG box domain-containing protein. (291 aa)
PV10_01045Uncharacterized protein. (259 aa)
PV10_01196Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (705 aa)
PV10_06117Uncharacterized protein. (478 aa)
PV10_04069Uncharacterized protein. (776 aa)
PV10_06838TFIID_20kDa domain-containing protein. (599 aa)
PV10_06920Uncharacterized protein. (1309 aa)
PV10_04936Uncharacterized protein. (686 aa)
PV10_05032Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (239 aa)
PV10_04777B-block_TFIIIC domain-containing protein. (1963 aa)
PV10_04433DUF3591 domain-containing protein. (1125 aa)
PV10_04147Uncharacterized protein. (556 aa)
B0A52_02609S1 domain-containing protein. (169 aa)
PV10_06236Transcription elongation factor S-II, variant. (306 aa)
PV10_05972Uncharacterized protein. (283 aa)
PV10_05370DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (297 aa)
B0A52_01899CBFD_NFYB_HMF domain-containing protein. (163 aa)
PV10_08605Fungal_trans domain-containing protein. (537 aa)
PV10_01121Uncharacterized protein. (373 aa)
PV10_03752Uncharacterized protein. (350 aa)
PV10_03730Uncharacterized protein. (267 aa)
PV10_06482HTH TFE/IIEalpha-type domain-containing protein. (487 aa)
PV10_06381DNA-directed RNA polymerase. (196 aa)
PV10_01598TFIIE beta domain-containing protein. (233 aa)
B0A52_06028TATA-box-binding protein, variant. (257 aa)
PV10_01046Zn(2)-C6 fungal-type domain-containing protein. (648 aa)
PV10_00205TAF8_C domain-containing protein. (323 aa)
PV10_05871Uncharacterized protein. (215 aa)
PV10_03389CBFD_NFYB_HMF domain-containing protein. (359 aa)
PV10_03370RPA43_OB domain-containing protein. (475 aa)
PV10_03205Acyl_transf_3 domain-containing protein. (466 aa)
PV10_02872Uncharacterized protein. (199 aa)
PV10_02711DNA repair helicase rad15. (818 aa)
PV10_02312SWIB domain-containing protein. (274 aa)
PV10_04759DUF4211 domain-containing protein. (650 aa)
PV10_03751Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
PV10_04282TAFII28 domain-containing protein. (348 aa)
PV10_06736Uncharacterized protein. (846 aa)
PV10_06445DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1218 aa)
PV10_04003TAF domain-containing protein. (447 aa)
PV10_06375TAFII55_N domain-containing protein. (747 aa)
PV10_06302Uncharacterized protein. (556 aa)
PV10_06724DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
PV10_07636BTB domain-containing protein. (957 aa)
PV10_08543Uncharacterized protein. (386 aa)
B0A52_01817RPOL4c domain-containing protein. (152 aa)
PV10_08396Uncharacterized protein. (969 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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