12 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_01138	Uncharacterized protein. (859 aa)
	PV10_04995	Fip1 domain-containing protein. (345 aa)
	PV10_06724	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
	PV10_07804	Uncharacterized protein. (240 aa)
	PV10_04890	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (269 aa)
	PV10_06533	Uncharacterized protein. (530 aa)
	PV10_06130	Cleavage and polyadenylation specificity factor subunit 2. (946 aa)
	PV10_07526	RRM domain-containing protein. (287 aa)
	PV10_09170	CID domain-containing protein. (657 aa)
	PV10_06549	Uncharacterized protein. (707 aa)
	PV10_06287	DUF3453 domain-containing protein. (740 aa)
	B0A52_01677	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (322 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01677	PV10_01138	A0A0D1ZSU4	A0A0D1ZS22	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Uncharacterized protein.	0.993
B0A52_01677	PV10_04995	A0A0D1ZSU4	A0A0D1ZGJ4	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Fip1 domain-containing protein.	0.957
B0A52_01677	PV10_06130	A0A0D1ZSU4	A0A0D1ZAB1	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Cleavage and polyadenylation specificity factor subunit 2.	0.990
B0A52_01677	PV10_06287	A0A0D1ZSU4	A0A0D1ZY21	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	DUF3453 domain-containing protein.	0.972
B0A52_01677	PV10_06549	A0A0D1ZSU4	A0A0D1ZBL8	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Uncharacterized protein.	0.987
B0A52_01677	PV10_07526	A0A0D1ZSU4	A0A0D1WME9	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	RRM domain-containing protein.	0.770
B0A52_01677	PV10_07804	A0A0D1ZSU4	A0A0D1WNB9	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	Uncharacterized protein.	0.966
PV10_01138	B0A52_01677	A0A0D1ZS22	A0A0D1ZSU4	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.993
PV10_01138	PV10_04890	A0A0D1ZS22	A0A0D1WWD7	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.885
PV10_01138	PV10_04995	A0A0D1ZS22	A0A0D1ZGJ4	Uncharacterized protein.	Fip1 domain-containing protein.	0.999
PV10_01138	PV10_06130	A0A0D1ZS22	A0A0D1ZAB1	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
PV10_01138	PV10_06287	A0A0D1ZS22	A0A0D1ZY21	Uncharacterized protein.	DUF3453 domain-containing protein.	0.999
PV10_01138	PV10_06549	A0A0D1ZS22	A0A0D1ZBL8	Uncharacterized protein.	Uncharacterized protein.	0.997
PV10_01138	PV10_06724	A0A0D1ZS22	A0A0D1ZC34	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.658
PV10_01138	PV10_07526	A0A0D1ZS22	A0A0D1WME9	Uncharacterized protein.	RRM domain-containing protein.	0.990
PV10_01138	PV10_07804	A0A0D1ZS22	A0A0D1WNB9	Uncharacterized protein.	Uncharacterized protein.	0.999
PV10_01138	PV10_09170	A0A0D1ZS22	A0A0D1WGU8	Uncharacterized protein.	CID domain-containing protein.	0.993
PV10_04890	PV10_01138	A0A0D1WWD7	A0A0D1ZS22	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Uncharacterized protein.	0.885
PV10_04890	PV10_04995	A0A0D1WWD7	A0A0D1ZGJ4	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Fip1 domain-containing protein.	0.973
PV10_04890	PV10_06130	A0A0D1WWD7	A0A0D1ZAB1	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specificity factor subunit 2.	0.890