5 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_08470	Uncharacterized protein. (581 aa)
	PV10_01005	Uncharacterized protein. (380 aa)
	PV10_04447	Uncharacterized protein. (576 aa)
	PV10_08415	Uncharacterized protein. (358 aa)
	PV10_03914	Cytochrome b5 heme-binding domain-containing protein. (555 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV10_01005	PV10_03914	A0A0D1ZRJ4	A0A0D1XWP6	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.796
PV10_01005	PV10_08415	A0A0D1ZRJ4	A0A0D1WIT1	Uncharacterized protein.	Uncharacterized protein.	0.812
PV10_03914	PV10_01005	A0A0D1XWP6	A0A0D1ZRJ4	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.796
PV10_03914	PV10_04447	A0A0D1XWP6	A0A0D1ZEQ6	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.790
PV10_03914	PV10_08415	A0A0D1XWP6	A0A0D1WIT1	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.801
PV10_04447	PV10_03914	A0A0D1ZEQ6	A0A0D1XWP6	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.790
PV10_04447	PV10_08415	A0A0D1ZEQ6	A0A0D1WIT1	Uncharacterized protein.	Uncharacterized protein.	0.801
PV10_04447	PV10_08470	A0A0D1ZEQ6	A0A0D1Z232	Uncharacterized protein.	Uncharacterized protein.	0.782
PV10_08415	PV10_01005	A0A0D1WIT1	A0A0D1ZRJ4	Uncharacterized protein.	Uncharacterized protein.	0.812
PV10_08415	PV10_03914	A0A0D1WIT1	A0A0D1XWP6	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.801
PV10_08415	PV10_04447	A0A0D1WIT1	A0A0D1ZEQ6	Uncharacterized protein.	Uncharacterized protein.	0.801
PV10_08415	PV10_08470	A0A0D1WIT1	A0A0D1Z232	Uncharacterized protein.	Uncharacterized protein.	0.799
PV10_08470	PV10_04447	A0A0D1Z232	A0A0D1ZEQ6	Uncharacterized protein.	Uncharacterized protein.	0.782
PV10_08470	PV10_08415	A0A0D1Z232	A0A0D1WIT1	Uncharacterized protein.	Uncharacterized protein.	0.799