STRINGSTRING
PV10_08006 PV10_08006 PV10_06803 PV10_06803 PV10_04787 PV10_04787 PV10_08280 PV10_08280 PV10_02559 PV10_02559 PV10_04267 PV10_04267
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_08006FtsJ domain-containing protein. (276 aa)
PV10_06803DHQ_synthase domain-containing protein. (506 aa)
PV10_04787Threonine synthase. (546 aa)
PV10_08280Chorismate synthase. (417 aa)
PV10_025593-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. (1606 aa)
PV10_04267Secondary thiamine-phosphate synthase enzyme. (200 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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