(33 nodes) Cytochrome complex assembly network (Exophiala mesophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B0A52_01048	Uncharacterized protein. (127 aa)
	PV10_01077	Uncharacterized protein. (192 aa)
	PV10_09087	Uncharacterized protein. (616 aa)
	PV10_06110	Uncharacterized protein. (117 aa)
	PV10_06371	Uncharacterized protein. (345 aa)
	PV10_03933	Uncharacterized protein. (136 aa)
	PV10_02478	Uncharacterized protein. (334 aa)
	PV10_02606	Uncharacterized protein; Belongs to the AAA ATPase family. (528 aa)
	PV10_08254	DUF2263 domain-containing protein. (321 aa)
	PV10_08276	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (123 aa)
	PV10_07023	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (347 aa)
	PV10_07083	Cytochrome c oxidase assembly protein COX20, mitochondrial; Involved in the assembly of the cytochrome c oxidase complex. Belongs to the COX20 family. (204 aa)
	PV10_08529	Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (333 aa)
	PV10_08594	Uncharacterized protein. (102 aa)
	PV10_07104	PEP_hydrolase domain-containing protein. (279 aa)
	PV10_05395	DUF2263 domain-containing protein. (305 aa)
	PV10_05565	Uncharacterized protein. (123 aa)
	PV10_05577	Uncharacterized protein. (591 aa)
	PV10_05737	Uncharacterized protein. (148 aa)
	PV10_06104	Ldi domain-containing protein. (666 aa)
	PV10_06223	Ldi domain-containing protein. (582 aa)
	PV10_06701	HIG1 domain-containing protein. (265 aa)
	PV10_03714	COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family. (177 aa)
	PV10_02066	Uncharacterized protein. (301 aa)
	PV10_00294	Uncharacterized protein. (110 aa)
	PV10_08736	zf-Mss51 domain-containing protein. (520 aa)
	PV10_08822	Uncharacterized protein. (322 aa)
	B0A52_01559	Cytochrome c oxidase assembly protein COX16, mitochondrial. (139 aa)
	PV10_01589	Uncharacterized protein. (142 aa)
	PV10_05215	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (309 aa)
	PV10_05836	FAD-binding FR-type domain-containing protein. (423 aa)
	PV10_02272	F-box domain-containing protein. (515 aa)
	PV10_08050	Uncharacterized protein. (223 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01048	PV10_01077	A0A0D1X4S8	A0A0D1X673	Uncharacterized protein.	Uncharacterized protein.	0.993
B0A52_01048	PV10_01589	A0A0D1X4S8	A0A0D1ZV82	Uncharacterized protein.	Uncharacterized protein.	0.572
B0A52_01048	PV10_03933	A0A0D1X4S8	A0A0D1WTW1	Uncharacterized protein.	Uncharacterized protein.	0.830
B0A52_01048	PV10_06104	A0A0D1X4S8	A0A0D1ZCE8	Uncharacterized protein.	Ldi domain-containing protein.	0.480
B0A52_01048	PV10_06223	A0A0D1X4S8	A0A0D1ZCN1	Uncharacterized protein.	Ldi domain-containing protein.	0.480
B0A52_01048	PV10_06701	A0A0D1X4S8	A0A0D1ZE64	Uncharacterized protein.	HIG1 domain-containing protein.	0.807
B0A52_01048	PV10_08050	A0A0D1X4S8	A0A0D1Z364	Uncharacterized protein.	Uncharacterized protein.	0.685
B0A52_01048	PV10_08276	A0A0D1X4S8	A0A0D1Z3Y9	Uncharacterized protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.994
B0A52_01048	PV10_08822	A0A0D1X4S8	A0A0D1ZR21	Uncharacterized protein.	Uncharacterized protein.	0.768
B0A52_01559	PV10_01077	A0A0D1ZTB6	A0A0D1X673	Cytochrome c oxidase assembly protein COX16, mitochondrial.	Uncharacterized protein.	0.405
PV10_00294	PV10_02606	A0A0D1ZP91	A0A0D1WZD0	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.408
PV10_00294	PV10_08254	A0A0D1ZP91	A0A0D1Z3X3	Uncharacterized protein.	DUF2263 domain-containing protein.	0.408
PV10_01077	B0A52_01048	A0A0D1X673	A0A0D1X4S8	Uncharacterized protein.	Uncharacterized protein.	0.993
PV10_01077	B0A52_01559	A0A0D1X673	A0A0D1ZTB6	Uncharacterized protein.	Cytochrome c oxidase assembly protein COX16, mitochondrial.	0.405
PV10_01077	PV10_01589	A0A0D1X673	A0A0D1ZV82	Uncharacterized protein.	Uncharacterized protein.	0.999
PV10_01077	PV10_03933	A0A0D1X673	A0A0D1WTW1	Uncharacterized protein.	Uncharacterized protein.	0.856
PV10_01077	PV10_05215	A0A0D1X673	A0A0D2A500	Uncharacterized protein.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.406
PV10_01077	PV10_06701	A0A0D1X673	A0A0D1ZE64	Uncharacterized protein.	HIG1 domain-containing protein.	0.964
PV10_01077	PV10_08050	A0A0D1X673	A0A0D1Z364	Uncharacterized protein.	Uncharacterized protein.	0.652
PV10_01077	PV10_08276	A0A0D1X673	A0A0D1Z3Y9	Uncharacterized protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.999