STRINGSTRING
PV10_00131 PV10_00131 PV10_02494 PV10_02494 PV10_01165 PV10_01165 PV10_01786 PV10_01786 PV10_07963 PV10_07963 PV10_08401 PV10_08401 PV10_08444 PV10_08444 B0A52_09227 B0A52_09227 PV10_03701 PV10_03701 PV10_03890 PV10_03890 PV10_04175 PV10_04175 PV10_04365 PV10_04365 PV10_04507 PV10_04507 B0A52_07527 B0A52_07527 PV10_04906 PV10_04906 YTM1 YTM1 B0A52_07967 B0A52_07967 PV10_02871 PV10_02871 PV10_08664 PV10_08664 PV10_07495 PV10_07495 PV10_07560 PV10_07560 PV10_06033 PV10_06033 PV10_06598 PV10_06598 PV10_03548 PV10_03548 PV10_00469 PV10_00469 PV10_08687 PV10_08687 PV10_07946 PV10_07946 B0A52_05243 B0A52_05243 PV10_01513 PV10_01513 PV10_01503 PV10_01503 PV10_02168 PV10_02168 PV10_02677 PV10_02677 PV10_04662 PV10_04662 PV10_02369 PV10_02369 SPB1 SPB1 PV10_03690 PV10_03690 PV10_06629 PV10_06629 PV10_06547 PV10_06547 NAT10 NAT10 PV10_01373 PV10_01373 PV10_07697 PV10_07697 B0A52_00259 B0A52_00259 ERB1 ERB1 B0A52_08313 B0A52_08313 PV10_00449 PV10_00449 PV10_00184 PV10_00184 PV10_00055 PV10_00055 PV10_03074 PV10_03074 PV10_08983 PV10_08983 PV10_09194 PV10_09194 PV10_02932 PV10_02932 PV10_03474 PV10_03474 PV10_00870 PV10_00870 PV10_02999 PV10_02999 PV10_02527 PV10_02527 NOP7 NOP7 PV10_01953 PV10_01953 PV10_04506 PV10_04506 PV10_03715 PV10_03715 PV10_07389 PV10_07389 PV10_07365 PV10_07365 PV10_04622 PV10_04622 PV10_04935 PV10_04935 PV10_04245 PV10_04245 PV10_03891 PV10_03891 PV10_00904 PV10_00904 PV10_01007 PV10_01007 PV10_01668 PV10_01668 PV10_01163 PV10_01163 PV10_00501 PV10_00501 PV10_02365 PV10_02365 PV10_06097 PV10_06097 PV10_06744 PV10_06744 PV10_06418 PV10_06418 PV10_05758 PV10_05758 PV10_05516 PV10_05516 PV10_07488 PV10_07488 PV10_07470 PV10_07470 PV10_07388 PV10_07388 PV10_07293 PV10_07293 PV10_07749 PV10_07749 PV10_07197 PV10_07197 PV10_08721 PV10_08721
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_00131C2H2-type domain-containing protein. (118 aa)
PV10_02494Uncharacterized protein. (382 aa)
PV10_01165Uncharacterized protein. (766 aa)
PV10_01786Bms1-type G domain-containing protein. (1173 aa)
PV10_07963Kri1_C domain-containing protein. (597 aa)
PV10_08401U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (762 aa)
PV10_08444Uncharacterized protein. (809 aa)
B0A52_09227S4 RNA-binding domain-containing protein. (188 aa)
PV10_03701Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
PV10_03890F-box domain-containing protein. (350 aa)
PV10_04175Uncharacterized protein. (397 aa)
PV10_04365Uncharacterized protein. (285 aa)
PV10_04507Uncharacterized protein. (355 aa)
B0A52_07527rRNA-processing protein FCF1. (193 aa)
PV10_04906RNA helicase. (857 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (462 aa)
B0A52_0796740S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (260 aa)
PV10_02871Nucleolar protein 58. (624 aa)
PV10_08664PUM-HD domain-containing protein. (660 aa)
PV10_07495Nop domain-containing protein. (521 aa)
PV10_07560Uncharacterized protein. (906 aa)
PV10_06033Uncharacterized protein. (1284 aa)
PV10_0659820S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (433 aa)
PV10_03548Uncharacterized protein. (705 aa)
PV10_00469Uncharacterized protein. (384 aa)
PV10_08687Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (460 aa)
PV10_07946Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (272 aa)
B0A52_0524340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (266 aa)
PV10_01513Bms1-type G domain-containing protein. (806 aa)
PV10_01503WD_REPEATS_REGION domain-containing protein. (555 aa)
PV10_02168Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (233 aa)
PV10_02677WD_REPEATS_REGION domain-containing protein. (440 aa)
PV10_04662Uncharacterized protein. (1815 aa)
PV10_02369WD_REPEATS_REGION domain-containing protein. (599 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (832 aa)
PV10_03690Sas10 domain-containing protein. (607 aa)
PV10_06629Uncharacterized protein. (408 aa)
PV10_06547rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (402 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1101 aa)
PV10_01373CP-type G domain-containing protein. (550 aa)
PV10_07697Uncharacterized protein. (519 aa)
B0A52_00259Ribosome biogenesis protein NSA2. (261 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (783 aa)
B0A52_08313HMG box domain-containing protein. (291 aa)
PV10_00449Uncharacterized protein. (365 aa)
PV10_00184WD_REPEATS_REGION domain-containing protein. (533 aa)
PV10_00055HAD_SAK_1 domain-containing protein. (581 aa)
PV10_03074NUC153 domain-containing protein. (728 aa)
PV10_0898340S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
PV10_09194Brix domain-containing protein. (296 aa)
PV10_02932Brix domain-containing protein. (459 aa)
PV10_03474Uncharacterized protein. (457 aa)
PV10_00870WD_REPEATS_REGION domain-containing protein. (1063 aa)
PV10_02999Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (580 aa)
PV10_02527ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (496 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (689 aa)
PV10_01953Uncharacterized protein. (1004 aa)
PV10_04506Uncharacterized protein. (283 aa)
PV10_03715U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (281 aa)
PV10_0738960S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
PV10_0736518S rRNA biogenesis protein RCL1. (405 aa)
PV10_04622RIO domain-containing protein. (392 aa)
PV10_04935Uncharacterized protein. (323 aa)
PV10_04245WD_REPEATS_REGION domain-containing protein. (632 aa)
PV10_03891Brix domain-containing protein. (342 aa)
PV10_00904Uncharacterized protein. (393 aa)
PV10_01007CBF domain-containing protein. (290 aa)
PV10_01668Uncharacterized protein. (931 aa)
PV10_01163rRNA 2'-O-methyltransferase fibrillarin. (326 aa)
PV10_00501U3 small nucleolar RNA-associated protein 22. (1140 aa)
PV10_02365WD_REPEATS_REGION domain-containing protein. (934 aa)
PV10_06097Brix domain-containing protein. (437 aa)
PV10_06744WD_REPEATS_REGION domain-containing protein. (889 aa)
PV10_06418DRIM domain-containing protein. (2584 aa)
PV10_05758Uncharacterized protein. (468 aa)
PV10_05516Protein MAK16; Belongs to the MAK16 family. (328 aa)
PV10_07488KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (344 aa)
PV10_07470Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
PV10_07388Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (698 aa)
PV10_07293Uncharacterized protein. (1034 aa)
PV10_07749WD_REPEATS_REGION domain-containing protein. (973 aa)
PV10_07197Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4842 aa)
PV10_08721Uncharacterized protein; Belongs to the DEAD box helicase family. (781 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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