12 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_01007	CBF domain-containing protein. (290 aa)
	PV10_06547	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (402 aa)
	PV10_07697	Uncharacterized protein. (519 aa)
	PV10_07560	Uncharacterized protein. (906 aa)
	PV10_06598	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (433 aa)
	PV10_04622	RIO domain-containing protein. (392 aa)
	PV10_06418	DRIM domain-containing protein. (2584 aa)
	PV10_05758	Uncharacterized protein. (468 aa)
	PV10_07488	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (344 aa)
	B0A52_05243	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (266 aa)
	PV10_01513	Bms1-type G domain-containing protein. (806 aa)
	PV10_01503	WD_REPEATS_REGION domain-containing protein. (555 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_05243	PV10_01513	A0A0D1Z2J4	A0A0D1YAZ2	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Bms1-type G domain-containing protein.	0.985
B0A52_05243	PV10_04622	A0A0D1Z2J4	A0A0D1ZHT8	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	RIO domain-containing protein.	0.996
B0A52_05243	PV10_05758	A0A0D1Z2J4	A0A0D1ZB32	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.996
B0A52_05243	PV10_06547	A0A0D1Z2J4	A0A0D1ZZ19	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.971
B0A52_05243	PV10_06598	A0A0D1Z2J4	A0A0D1XV56	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.995
B0A52_05243	PV10_07488	A0A0D1Z2J4	A0A0D1Z813	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.967
B0A52_05243	PV10_07560	A0A0D1Z2J4	A0A0D1XQ45	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.950
B0A52_05243	PV10_07697	A0A0D1Z2J4	A0A0D1ZUB4	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.996
PV10_01007	PV10_01503	A0A0D1X610	A0A0D1YAY1	CBF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
PV10_01007	PV10_01513	A0A0D1X610	A0A0D1YAZ2	CBF domain-containing protein.	Bms1-type G domain-containing protein.	0.785
PV10_01007	PV10_04622	A0A0D1X610	A0A0D1ZHT8	CBF domain-containing protein.	RIO domain-containing protein.	0.670
PV10_01007	PV10_05758	A0A0D1X610	A0A0D1ZB32	CBF domain-containing protein.	Uncharacterized protein.	0.822
PV10_01007	PV10_06418	A0A0D1X610	A0A0D1ZB67	CBF domain-containing protein.	DRIM domain-containing protein.	0.999
PV10_01007	PV10_06547	A0A0D1X610	A0A0D1ZZ19	CBF domain-containing protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.981
PV10_01007	PV10_06598	A0A0D1X610	A0A0D1XV56	CBF domain-containing protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.921
PV10_01007	PV10_07488	A0A0D1X610	A0A0D1Z813	CBF domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
PV10_01007	PV10_07560	A0A0D1X610	A0A0D1XQ45	CBF domain-containing protein.	Uncharacterized protein.	0.999
PV10_01007	PV10_07697	A0A0D1X610	A0A0D1ZUB4	CBF domain-containing protein.	Uncharacterized protein.	0.998
PV10_01503	PV10_01007	A0A0D1YAY1	A0A0D1X610	WD_REPEATS_REGION domain-containing protein.	CBF domain-containing protein.	0.999
PV10_01503	PV10_01513	A0A0D1YAY1	A0A0D1YAZ2	WD_REPEATS_REGION domain-containing protein.	Bms1-type G domain-containing protein.	0.880