9 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

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co-expression

protein homology

Your Input:
	PV10_02866	Uncharacterized protein. (235 aa)
	URM1	Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (105 aa)
	PV10_03207	Polyubiquitin. (229 aa)
	PV10_08035	Ubiquitin-like domain-containing protein. (101 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV10_01659	Ubiquitin-60S ribosomal protein L40. (210 aa)
	PV10_06471	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (163 aa)
	PV10_01749	RRN7-type domain-containing protein. (649 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00659	PV10_01659	A0A0D1ZQI9	A0A0D1ZVG6	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.974
B0A52_00659	PV10_01749	A0A0D1ZQI9	A0A0D2AGL9	Ubiquitin-40S ribosomal protein S27a.	RRN7-type domain-containing protein.	0.973
B0A52_00659	PV10_03207	A0A0D1ZQI9	A0A0D1Y4J0	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.969
B0A52_00659	PV10_08035	A0A0D1ZQI9	A0A0D1Z347	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.821
PV10_01659	B0A52_00659	A0A0D1ZVG6	A0A0D1ZQI9	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.974
PV10_01659	PV10_03207	A0A0D1ZVG6	A0A0D1Y4J0	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin.	0.972
PV10_01659	PV10_08035	A0A0D1ZVG6	A0A0D1Z347	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-like domain-containing protein.	0.814
PV10_01659	PV10_08689	A0A0D1ZVG6	A0A0D1Z5B3	Ubiquitin-60S ribosomal protein L40.	BZIP domain-containing protein.	0.963
PV10_01749	B0A52_00659	A0A0D2AGL9	A0A0D1ZQI9	RRN7-type domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.973
PV10_01749	PV10_03207	A0A0D2AGL9	A0A0D1Y4J0	RRN7-type domain-containing protein.	Polyubiquitin.	0.972
PV10_01749	PV10_08035	A0A0D2AGL9	A0A0D1Z347	RRN7-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.814
PV10_01749	PV10_08689	A0A0D2AGL9	A0A0D1Z5B3	RRN7-type domain-containing protein.	BZIP domain-containing protein.	0.963
PV10_02866	PV10_08035	A0A0D1X097	A0A0D1Z347	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.480
PV10_03207	B0A52_00659	A0A0D1Y4J0	A0A0D1ZQI9	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.969
PV10_03207	PV10_01659	A0A0D1Y4J0	A0A0D1ZVG6	Polyubiquitin.	Ubiquitin-60S ribosomal protein L40.	0.972
PV10_03207	PV10_01749	A0A0D1Y4J0	A0A0D2AGL9	Polyubiquitin.	RRN7-type domain-containing protein.	0.972
PV10_03207	PV10_08035	A0A0D1Y4J0	A0A0D1Z347	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.864
PV10_03207	PV10_08689	A0A0D1Y4J0	A0A0D1Z5B3	Polyubiquitin.	BZIP domain-containing protein.	0.959
PV10_06471	PV10_08035	A0A0D1ZYS0	A0A0D1Z347	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	Ubiquitin-like domain-containing protein.	0.473
PV10_08035	B0A52_00659	A0A0D1Z347	A0A0D1ZQI9	Ubiquitin-like domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.821