STRINGSTRING
PV10_09194 PV10_09194 PV10_03715 PV10_03715 PV10_01953 PV10_01953 PV10_02527 PV10_02527 PV10_00469 PV10_00469 PV10_00870 PV10_00870 PV10_01007 PV10_01007 PV10_01165 PV10_01165 PV10_08401 PV10_08401 PV10_07495 PV10_07495 PV10_07560 PV10_07560 PV10_06033 PV10_06033 PV10_03701 PV10_03701 PV10_04906 PV10_04906 B0A52_07967 B0A52_07967 PV10_02871 PV10_02871 B0A52_07527 B0A52_07527 B0A52_09227 B0A52_09227 PV10_01503 PV10_01503 PV10_08687 PV10_08687 PV10_07749 PV10_07749 PV10_07293 PV10_07293 PV10_07488 PV10_07488 PV10_06418 PV10_06418 PV10_06744 PV10_06744 PV10_04245 PV10_04245 PV10_04935 PV10_04935 PV10_04662 PV10_04662 PV10_02494 PV10_02494 PV10_02365 PV10_02365 PV10_08983 PV10_08983 PV10_03074 PV10_03074 PV10_00055 PV10_00055 PV10_00184 PV10_00184 B0A52_08313 B0A52_08313 PV10_03690 PV10_03690 PV10_02369 PV10_02369 PV10_02677 PV10_02677 PV10_00501 PV10_00501 PV10_01163 PV10_01163 PV10_01668 PV10_01668
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_09194Brix domain-containing protein. (296 aa)
PV10_03715U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (281 aa)
PV10_01953Uncharacterized protein. (1004 aa)
PV10_02527ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (496 aa)
PV10_00469Uncharacterized protein. (384 aa)
PV10_00870WD_REPEATS_REGION domain-containing protein. (1063 aa)
PV10_01007CBF domain-containing protein. (290 aa)
PV10_01165Uncharacterized protein. (766 aa)
PV10_08401U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (762 aa)
PV10_07495Nop domain-containing protein. (521 aa)
PV10_07560Uncharacterized protein. (906 aa)
PV10_06033Uncharacterized protein. (1284 aa)
PV10_03701Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
PV10_04906RNA helicase. (857 aa)
B0A52_0796740S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (260 aa)
PV10_02871Nucleolar protein 58. (624 aa)
B0A52_07527rRNA-processing protein FCF1. (193 aa)
B0A52_09227S4 RNA-binding domain-containing protein. (188 aa)
PV10_01503WD_REPEATS_REGION domain-containing protein. (555 aa)
PV10_08687Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (460 aa)
PV10_07749WD_REPEATS_REGION domain-containing protein. (973 aa)
PV10_07293Uncharacterized protein. (1034 aa)
PV10_07488KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (344 aa)
PV10_06418DRIM domain-containing protein. (2584 aa)
PV10_06744WD_REPEATS_REGION domain-containing protein. (889 aa)
PV10_04245WD_REPEATS_REGION domain-containing protein. (632 aa)
PV10_04935Uncharacterized protein. (323 aa)
PV10_04662Uncharacterized protein. (1815 aa)
PV10_02494Uncharacterized protein. (382 aa)
PV10_02365WD_REPEATS_REGION domain-containing protein. (934 aa)
PV10_0898340S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
PV10_03074NUC153 domain-containing protein. (728 aa)
PV10_00055HAD_SAK_1 domain-containing protein. (581 aa)
PV10_00184WD_REPEATS_REGION domain-containing protein. (533 aa)
B0A52_08313HMG box domain-containing protein. (291 aa)
PV10_03690Sas10 domain-containing protein. (607 aa)
PV10_02369WD_REPEATS_REGION domain-containing protein. (599 aa)
PV10_02677WD_REPEATS_REGION domain-containing protein. (440 aa)
PV10_00501U3 small nucleolar RNA-associated protein 22. (1140 aa)
PV10_01163rRNA 2'-O-methyltransferase fibrillarin. (326 aa)
PV10_01668Uncharacterized protein. (931 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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