7 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_06736	Uncharacterized protein. (846 aa)
	PV10_08487	Uncharacterized protein. (377 aa)
	NTH1	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (437 aa)
	PV10_02711	DNA repair helicase rad15. (818 aa)
	PV10_02437	Uncharacterized protein. (1343 aa)
	PV10_06413	DNA repair protein. (364 aa)
	PV10_05473	ERCC4 domain-containing protein. (948 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NTH1	PV10_02437	A0A0D1Y905	A0A0D1ZJ95	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uncharacterized protein.	0.662
NTH1	PV10_02711	A0A0D1Y905	A0A0D1ZKA8	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	DNA repair helicase rad15.	0.471
NTH1	PV10_05473	A0A0D1Y905	A0A0D1Z7W0	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	ERCC4 domain-containing protein.	0.635
NTH1	PV10_06413	A0A0D1Y905	A0A0D1XUN9	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	DNA repair protein.	0.597
NTH1	PV10_06736	A0A0D1Y905	A0A0D1ZE99	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uncharacterized protein.	0.448
NTH1	PV10_08487	A0A0D1Y905	A0A0D1Z4J4	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uncharacterized protein.	0.507
PV10_02437	NTH1	A0A0D1ZJ95	A0A0D1Y905	Uncharacterized protein.	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	0.662
PV10_02437	PV10_02711	A0A0D1ZJ95	A0A0D1ZKA8	Uncharacterized protein.	DNA repair helicase rad15.	0.967
PV10_02437	PV10_05473	A0A0D1ZJ95	A0A0D1Z7W0	Uncharacterized protein.	ERCC4 domain-containing protein.	0.917
PV10_02437	PV10_06413	A0A0D1ZJ95	A0A0D1XUN9	Uncharacterized protein.	DNA repair protein.	0.879
PV10_02437	PV10_06736	A0A0D1ZJ95	A0A0D1ZE99	Uncharacterized protein.	Uncharacterized protein.	0.978
PV10_02437	PV10_08487	A0A0D1ZJ95	A0A0D1Z4J4	Uncharacterized protein.	Uncharacterized protein.	0.882
PV10_02711	NTH1	A0A0D1ZKA8	A0A0D1Y905	DNA repair helicase rad15.	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	0.471
PV10_02711	PV10_02437	A0A0D1ZKA8	A0A0D1ZJ95	DNA repair helicase rad15.	Uncharacterized protein.	0.967
PV10_02711	PV10_05473	A0A0D1ZKA8	A0A0D1Z7W0	DNA repair helicase rad15.	ERCC4 domain-containing protein.	0.843
PV10_02711	PV10_06413	A0A0D1ZKA8	A0A0D1XUN9	DNA repair helicase rad15.	DNA repair protein.	0.978
PV10_02711	PV10_06736	A0A0D1ZKA8	A0A0D1ZE99	DNA repair helicase rad15.	Uncharacterized protein.	0.999
PV10_02711	PV10_08487	A0A0D1ZKA8	A0A0D1Z4J4	DNA repair helicase rad15.	Uncharacterized protein.	0.819
PV10_05473	NTH1	A0A0D1Z7W0	A0A0D1Y905	ERCC4 domain-containing protein.	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	0.635
PV10_05473	PV10_02437	A0A0D1Z7W0	A0A0D1ZJ95	ERCC4 domain-containing protein.	Uncharacterized protein.	0.917