STRINGSTRING
B0A52_01579 B0A52_01579 PV10_06744 PV10_06744 PV10_05758 PV10_05758 PV10_05742 PV10_05742 PV10_07488 PV10_07488 PV10_07749 PV10_07749 PV10_07328 PV10_07328 PV10_08440 PV10_08440 PV10_08407 PV10_08407 PV10_01513 PV10_01513 PV10_01503 PV10_01503 PV10_00112 PV10_00112 B0A52_04046 B0A52_04046 B0A52_07527 B0A52_07527 PV10_02871 PV10_02871 PV10_02329 PV10_02329 PV10_03701 PV10_03701 PV10_06598 PV10_06598 PV10_06422 PV10_06422 PV10_06033 PV10_06033 PV10_05707 PV10_05707 PV10_07600 PV10_07600 PV10_07560 PV10_07560 PV10_08401 PV10_08401 PV10_07963 PV10_07963 PV10_01786 PV10_01786 PV10_01165 PV10_01165 PV10_01007 PV10_01007 PV10_00991 PV10_00991 PV10_00870 PV10_00870 PV10_00469 PV10_00469 PV10_00071 PV10_00071 TSR3 TSR3 PV10_02971 PV10_02971 RPS0 RPS0 PV10_02527 PV10_02527 PV10_02173 PV10_02173 PV10_01953 PV10_01953 PV10_06376 PV10_06376 PV10_05517 PV10_05517 PV10_07365 PV10_07365 B0A52_09281 B0A52_09281 PV10_01668 PV10_01668 PV10_01510 PV10_01510 PV10_00885 PV10_00885 PV10_02677 PV10_02677 PV10_02369 PV10_02369 PV10_05181 PV10_05181 PV10_03690 PV10_03690 PV10_06629 PV10_06629 PV10_06547 PV10_06547 PV10_06364 PV10_06364 NAT10 NAT10 PV10_05529 PV10_05529 PV10_01750 PV10_01750 PV10_07697 PV10_07697 B0A52_04749 B0A52_04749 PV10_01172 PV10_01172 PV10_00711 PV10_00711 PV10_03505 PV10_03505 PV10_00279 PV10_00279 B0A52_07157 B0A52_07157 PV10_00184 PV10_00184 PV10_03074 PV10_03074 PV10_09135 PV10_09135 PV10_08983 PV10_08983 PV10_03474 PV10_03474 PV10_02365 PV10_02365 PV10_02168 PV10_02168 PV10_02494 PV10_02494 B0A52_07938 B0A52_07938 PV10_04662 PV10_04662 PV10_04622 PV10_04622 B0A52_09584 B0A52_09584
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B0A52_0157940S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family. (143 aa)
PV10_06744WD_REPEATS_REGION domain-containing protein. (889 aa)
PV10_05758Uncharacterized protein. (468 aa)
PV10_05742Uncharacterized protein. (1739 aa)
PV10_07488KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (344 aa)
PV10_07749WD_REPEATS_REGION domain-containing protein. (973 aa)
PV10_0732840S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
PV10_08440Uncharacterized protein. (286 aa)
PV10_08407Uncharacterized protein. (439 aa)
PV10_01513Bms1-type G domain-containing protein. (806 aa)
PV10_01503WD_REPEATS_REGION domain-containing protein. (555 aa)
PV10_0011240S ribosomal protein S19. (154 aa)
B0A52_0404640S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
B0A52_07527rRNA-processing protein FCF1. (193 aa)
PV10_02871Nucleolar protein 58. (624 aa)
PV10_02329Pre-rRNA-processing protein PNO1. (263 aa)
PV10_03701Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
PV10_0659820S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (433 aa)
PV10_06422Uncharacterized protein. (577 aa)
PV10_06033Uncharacterized protein. (1284 aa)
PV10_05707Uncharacterized protein. (287 aa)
PV10_0760040S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
PV10_07560Uncharacterized protein. (906 aa)
PV10_08401U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (762 aa)
PV10_07963Kri1_C domain-containing protein. (597 aa)
PV10_01786Bms1-type G domain-containing protein. (1173 aa)
PV10_01165Uncharacterized protein. (766 aa)
PV10_01007CBF domain-containing protein. (290 aa)
PV10_00991Uncharacterized protein. (733 aa)
PV10_00870WD_REPEATS_REGION domain-containing protein. (1063 aa)
PV10_00469Uncharacterized protein. (384 aa)
PV10_00071Uncharacterized protein. (520 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (390 aa)
PV10_02971Uncharacterized protein. (174 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (286 aa)
PV10_02527ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (496 aa)
PV10_02173Uncharacterized protein. (1117 aa)
PV10_01953Uncharacterized protein. (1004 aa)
PV10_06376Uncharacterized protein. (918 aa)
PV10_05517Fcf2 domain-containing protein. (227 aa)
PV10_0736518S rRNA biogenesis protein RCL1. (405 aa)
B0A52_0928140S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
PV10_01668Uncharacterized protein. (931 aa)
PV10_01510Utp12 domain-containing protein. (894 aa)
PV10_00885NUC173 domain-containing protein. (1320 aa)
PV10_02677WD_REPEATS_REGION domain-containing protein. (440 aa)
PV10_02369WD_REPEATS_REGION domain-containing protein. (599 aa)
PV10_05181Uncharacterized protein. (890 aa)
PV10_03690Sas10 domain-containing protein. (607 aa)
PV10_06629Uncharacterized protein. (408 aa)
PV10_06547rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (402 aa)
PV10_06364Uncharacterized protein. (210 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1101 aa)
PV10_05529Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (191 aa)
PV10_01750Ribosomal_S7 domain-containing protein. (336 aa)
PV10_07697Uncharacterized protein. (519 aa)
B0A52_0474940S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (203 aa)
PV10_01172Uncharacterized protein. (678 aa)
PV10_00711PDCD2_C domain-containing protein. (411 aa)
PV10_03505Sm domain-containing protein. (140 aa)
PV10_00279MI domain-containing protein. (897 aa)
B0A52_0715740S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
PV10_00184WD_REPEATS_REGION domain-containing protein. (533 aa)
PV10_03074NUC153 domain-containing protein. (728 aa)
PV10_09135DUF2235 domain-containing protein. (500 aa)
PV10_0898340S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
PV10_03474Uncharacterized protein. (457 aa)
PV10_02365WD_REPEATS_REGION domain-containing protein. (934 aa)
PV10_02168Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (233 aa)
PV10_02494Uncharacterized protein. (382 aa)
B0A52_07938Uncharacterized protein. (272 aa)
PV10_04662Uncharacterized protein. (1815 aa)
PV10_04622RIO domain-containing protein. (392 aa)
B0A52_0958437S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family. (91 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.