4 items (Exophiala mesophila) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_05370	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (297 aa)
	B0A52_01643	Uncharacterized protein. (152 aa)
	PV10_05633	RNA_pol_L_2 domain-containing protein. (129 aa)
	PV10_06381	DNA-directed RNA polymerase. (196 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01643	PV10_05370	A0A0D1Z529	A0A0D1XRL2	Uncharacterized protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.960
B0A52_01643	PV10_05633	A0A0D1Z529	A0A0D1ZWA0	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
B0A52_01643	PV10_06381	A0A0D1Z529	A0A0D1WRU2	Uncharacterized protein.	DNA-directed RNA polymerase.	0.997
PV10_05370	B0A52_01643	A0A0D1XRL2	A0A0D1Z529	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	Uncharacterized protein.	0.960
PV10_05370	PV10_05633	A0A0D1XRL2	A0A0D1ZWA0	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	RNA_pol_L_2 domain-containing protein.	0.983
PV10_05370	PV10_06381	A0A0D1XRL2	A0A0D1WRU2	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed RNA polymerase.	0.986
PV10_05633	B0A52_01643	A0A0D1ZWA0	A0A0D1Z529	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999
PV10_05633	PV10_05370	A0A0D1ZWA0	A0A0D1XRL2	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.983
PV10_05633	PV10_06381	A0A0D1ZWA0	A0A0D1WRU2	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase.	0.998
PV10_06381	B0A52_01643	A0A0D1WRU2	A0A0D1Z529	DNA-directed RNA polymerase.	Uncharacterized protein.	0.997
PV10_06381	PV10_05370	A0A0D1WRU2	A0A0D1XRL2	DNA-directed RNA polymerase.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.986
PV10_06381	PV10_05633	A0A0D1WRU2	A0A0D1ZWA0	DNA-directed RNA polymerase.	RNA_pol_L_2 domain-containing protein.	0.998