STRINGSTRING
PV10_01300 PV10_01300 PV10_08358 PV10_08358 PV10_07591 PV10_07591 PV10_07771 PV10_07771 PV10_05871 PV10_05871 PV10_03730 PV10_03730 PV10_03884 PV10_03884 PV10_04890 PV10_04890 PV10_04951 PV10_04951 PV10_05034 PV10_05034 PV10_02971 PV10_02971 B0A52_00855 B0A52_00855 PV10_07064 PV10_07064 B0A52_01899 B0A52_01899 PV10_07823 PV10_07823 URM1 URM1 PV10_05636 PV10_05636 PV10_05972 PV10_05972 PV10_02384 PV10_02384 PV10_01606 PV10_01606 PV10_01856 PV10_01856 PV10_01908 PV10_01908 PV10_09129 PV10_09129 PV10_07986 PV10_07986 PV10_08772 PV10_08772 PV10_08190 PV10_08190 PV10_08467 PV10_08467 PV10_08565 PV10_08565 PV10_08653 PV10_08653 PV10_06838 PV10_06838 B0A52_05764 B0A52_05764 PV10_05519 PV10_05519 B0A52_05124 B0A52_05124 PV10_06078 PV10_06078 PV10_03813 PV10_03813 PV10_04003 PV10_04003 PV10_04282 PV10_04282 PV10_03883 PV10_03883 PV10_04759 PV10_04759 PV10_04961 PV10_04961 PV10_04710 PV10_04710 PV10_05216 PV10_05216 B0A52_02906 B0A52_02906 PV10_03006 PV10_03006 PV10_02860 PV10_02860 PV10_03132 PV10_03132 PV10_03205 PV10_03205 PV10_03389 PV10_03389 B0A52_00854 B0A52_00854 PV10_01345 PV10_01345 PV10_07253 PV10_07253 PV10_05312 PV10_05312 PV10_01584 PV10_01584 PV10_05633 PV10_05633 PV10_06050 PV10_06050 PV10_06374 PV10_06374 PV10_03762 PV10_03762 B0A52_04834 B0A52_04834 PV10_04853 PV10_04853 PV10_00012 PV10_00012 PV10_00205 PV10_00205 PV10_00998 PV10_00998 PV10_01372 PV10_01372
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_01300Uncharacterized protein. (273 aa)
PV10_08358Uncharacterized protein. (949 aa)
PV10_07591RPOLD domain-containing protein. (373 aa)
PV10_07771MADS-box domain-containing protein. (552 aa)
PV10_05871Uncharacterized protein. (215 aa)
PV10_03730Uncharacterized protein. (267 aa)
PV10_03884CBFD_NFYB_HMF domain-containing protein. (101 aa)
PV10_04890Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (269 aa)
PV10_04951Uncharacterized protein. (110 aa)
PV10_05034HTH myb-type domain-containing protein. (699 aa)
PV10_02971Uncharacterized protein. (174 aa)
B0A52_00855Histone H2A; Belongs to the histone H2A family. (132 aa)
PV10_07064Uncharacterized protein. (610 aa)
B0A52_01899CBFD_NFYB_HMF domain-containing protein. (163 aa)
PV10_07823BHLH domain-containing protein. (619 aa)
URM1Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (105 aa)
PV10_05636Histone H3-like centromeric protein cnp1. (158 aa)
PV10_05972Uncharacterized protein. (283 aa)
PV10_02384Bromo domain-containing protein. (1185 aa)
PV10_01606DUF2236 domain-containing protein. (487 aa)
PV10_01856Uncharacterized protein. (243 aa)
PV10_01908BHLH domain-containing protein. (884 aa)
PV10_09129Uncharacterized protein. (815 aa)
PV10_07986Uncharacterized protein. (2197 aa)
PV10_08772Aspartate-semialdehyde dehydrogenase. (366 aa)
PV10_08190BHLH domain-containing protein. (547 aa)
PV10_08467Uncharacterized protein. (188 aa)
PV10_08565BHLH domain-containing protein. (538 aa)
PV10_08653BHLH domain-containing protein. (456 aa)
PV10_06838TFIID_20kDa domain-containing protein. (599 aa)
B0A52_05764Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PV10_05519CBFD_NFYB_HMF domain-containing protein. (292 aa)
B0A52_05124MADS-box domain-containing protein. (208 aa)
PV10_06078BHLH domain-containing protein. (263 aa)
PV10_03813Uncharacterized protein. (373 aa)
PV10_04003TAF domain-containing protein. (447 aa)
PV10_04282TAFII28 domain-containing protein. (348 aa)
PV10_03883Uncharacterized protein. (449 aa)
PV10_04759DUF4211 domain-containing protein. (650 aa)
PV10_04961RPOLD domain-containing protein. (337 aa)
PV10_04710CBFD_NFYB_HMF domain-containing protein. (185 aa)
PV10_05216CENP-T_C domain-containing protein. (498 aa)
B0A52_02906Histone H3; Belongs to the histone H3 family. (136 aa)
PV10_03006RNA_pol_L_2 domain-containing protein. (122 aa)
PV10_02860Uncharacterized protein. (746 aa)
PV10_03132BHLH domain-containing protein. (464 aa)
PV10_03205Acyl_transf_3 domain-containing protein. (466 aa)
PV10_03389CBFD_NFYB_HMF domain-containing protein. (359 aa)
B0A52_00854Histone H2B; Belongs to the histone H2B family. (140 aa)
PV10_01345Uncharacterized protein. (320 aa)
PV10_07253CBFD_NFYB_HMF domain-containing protein. (155 aa)
PV10_05312Uncharacterized protein. (419 aa)
PV10_01584Uncharacterized protein; Belongs to the GrpE family. (268 aa)
PV10_05633RNA_pol_L_2 domain-containing protein. (129 aa)
PV10_06050Uncharacterized protein. (205 aa)
PV10_06374BTP domain-containing protein. (236 aa)
PV10_03762Uncharacterized protein. (370 aa)
B0A52_04834Histone H2A; Belongs to the histone H2A family. (139 aa)
PV10_04853Uncharacterized protein. (967 aa)
PV10_00012Uncharacterized protein. (305 aa)
PV10_00205TAF8_C domain-containing protein. (323 aa)
PV10_00998Uncharacterized protein. (266 aa)
PV10_01372CBFD_NFYB_HMF domain-containing protein. (349 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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