(3 nodes) Transcription factor TFIIK complex network (Exophiala mesophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_02098	RING-type domain-containing protein. (269 aa)
	PV10_05897	CYCLIN domain-containing protein; Belongs to the cyclin family. (403 aa)
	PV10_02041	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (422 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV10_02041	PV10_02098	A0A0D2A5G3	A0A0D1ZK71	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.999
PV10_02041	PV10_05897	A0A0D2A5G3	A0A0D1XT79	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.999
PV10_02098	PV10_02041	A0A0D1ZK71	A0A0D2A5G3	RING-type domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.999
PV10_02098	PV10_05897	A0A0D1ZK71	A0A0D1XT79	RING-type domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.999
PV10_05897	PV10_02041	A0A0D1XT79	A0A0D2A5G3	CYCLIN domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.999
PV10_05897	PV10_02098	A0A0D1XT79	A0A0D1ZK71	CYCLIN domain-containing protein; Belongs to the cyclin family.	RING-type domain-containing protein.	0.999