24 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_08011	Pre-mRNA-splicing factor clf1. (675 aa)
	PV10_01265	Branchpoint-bridging protein. (587 aa)
	PV10_08116	Uncharacterized protein. (770 aa)
	PV10_08223	Uncharacterized protein. (1189 aa)
	PV10_02944	PSP domain-containing protein. (576 aa)
	PV10_02013	Uncharacterized protein. (560 aa)
	PV10_05389	Uncharacterized protein. (336 aa)
	PV10_07725	Uncharacterized protein. (479 aa)
	PV10_06919	Small nuclear ribonucleoprotein G. (81 aa)
	PV10_07523	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (571 aa)
	PV10_04877	Uncharacterized protein. (1753 aa)
	B0A52_01428	Small nuclear ribonucleoprotein Sm D2. (114 aa)
	B0A52_09991	Sm domain-containing protein. (223 aa)
	PV10_01232	Matrin-type domain-containing protein. (520 aa)
	PV10_08998	Uncharacterized protein. (543 aa)
	PV10_08258	Matrin-type domain-containing protein. (238 aa)
	PV10_03505	Sm domain-containing protein. (140 aa)
	PV10_07861	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (132 aa)
	PV10_03028	RRM domain-containing protein. (200 aa)
	PV10_00085	SF3b1 domain-containing protein. (1213 aa)
	PV10_07318	Uncharacterized protein. (768 aa)
	PV10_04520	RRM domain-containing protein. (401 aa)
	B0A52_08158	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	PV10_02820	Uncharacterized protein. (311 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01428	B0A52_08158	A0A0D1ZHQ3	A0A0D1WWG2	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
B0A52_01428	B0A52_09991	A0A0D1ZHQ3	A0A0D1ZJ13	Small nuclear ribonucleoprotein Sm D2.	Sm domain-containing protein.	0.998
B0A52_01428	PV10_00085	A0A0D1ZHQ3	A0A0D2AB73	Small nuclear ribonucleoprotein Sm D2.	SF3b1 domain-containing protein.	0.982
B0A52_01428	PV10_01232	A0A0D1ZHQ3	A0A0D1YA50	Small nuclear ribonucleoprotein Sm D2.	Matrin-type domain-containing protein.	0.986
B0A52_01428	PV10_01265	A0A0D1ZHQ3	A0A0D1YAB3	Small nuclear ribonucleoprotein Sm D2.	Branchpoint-bridging protein.	0.540
B0A52_01428	PV10_02013	A0A0D1ZHQ3	A0A0D1Y129	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.723
B0A52_01428	PV10_02820	A0A0D1ZHQ3	A0A0D1X063	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.952
B0A52_01428	PV10_02944	A0A0D1ZHQ3	A0A0D1Y3N5	Small nuclear ribonucleoprotein Sm D2.	PSP domain-containing protein.	0.994
B0A52_01428	PV10_03028	A0A0D1ZHQ3	A0A0D2A8R1	Small nuclear ribonucleoprotein Sm D2.	RRM domain-containing protein.	0.995
B0A52_01428	PV10_03505	A0A0D1ZHQ3	A0A0D1ZPM0	Small nuclear ribonucleoprotein Sm D2.	Sm domain-containing protein.	0.995
B0A52_01428	PV10_04520	A0A0D1ZHQ3	A0A0D1WVB9	Small nuclear ribonucleoprotein Sm D2.	RRM domain-containing protein.	0.997
B0A52_01428	PV10_04877	A0A0D1ZHQ3	A0A0D1ZG65	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.855
B0A52_01428	PV10_05389	A0A0D1ZHQ3	A0A0D1XRP3	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.977
B0A52_01428	PV10_06919	A0A0D1ZHQ3	A0A0D1XN41	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein G.	0.999
B0A52_01428	PV10_07318	A0A0D1ZHQ3	A0A0D1WLU8	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.927
B0A52_01428	PV10_07523	A0A0D1ZHQ3	A0A0D1Z5T2	Small nuclear ribonucleoprotein Sm D2.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.975
B0A52_01428	PV10_07725	A0A0D1ZHQ3	A0A0D1XQN6	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.971
B0A52_01428	PV10_07861	A0A0D1ZHQ3	A0A0D1ZUV8	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
B0A52_01428	PV10_08011	A0A0D1ZHQ3	A0A0D1XJE7	Small nuclear ribonucleoprotein Sm D2.	Pre-mRNA-splicing factor clf1.	0.982
B0A52_01428	PV10_08116	A0A0D1ZHQ3	A0A0D1Z0V5	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.731