39 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_01882	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (508 aa)
	PV10_08276	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (123 aa)
	PV10_07334	Uncharacterized protein; Belongs to the multicopper oxidase family. (627 aa)
	PV10_08852	Uncharacterized protein. (548 aa)
	B0A52_09313	Uncharacterized protein. (103 aa)
	PV10_07873	Uncharacterized protein. (271 aa)
	PV10_07590	NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family. (480 aa)
	PV10_05634	Uncharacterized protein; Belongs to the complex I LYR family. (123 aa)
	PV10_06625	NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family. (301 aa)
	PV10_00853	EF-hand domain-containing protein. (2128 aa)
	PV10_06848	Uncharacterized protein. (239 aa)
	PV10_01563	UCR_hinge domain-containing protein. (133 aa)
	PV10_01625	Uncharacterized protein. (86 aa)
	PV10_05556	L51_S25_CI-B8 domain-containing protein. (93 aa)
	PV10_04268	zf-CHCC domain-containing protein. (243 aa)
	PV10_03450	Uncharacterized protein; Belongs to the multicopper oxidase family. (632 aa)
	PV10_00124	MCU domain-containing protein. (465 aa)
	PV10_00253	Uncharacterized protein. (119 aa)
	PV10_06696	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (158 aa)
	PV10_04442	Uncharacterized protein. (227 aa)
	PV10_03219	Uncharacterized protein. (1102 aa)
	B0A52_07543	Cytochrome c1, heme protein, mitochondrial. (321 aa)
	PV10_08387	Uncharacterized protein. (710 aa)
	PV10_04711	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (244 aa)
	PV10_06441	Uncharacterized protein. (69 aa)
	PV10_05759	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (139 aa)
	PV10_08738	Uncharacterized protein. (160 aa)
	PV10_02114	ABC transporter domain-containing protein. (635 aa)
	PV10_00300	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial. (228 aa)
	PV10_01226	Uncharacterized protein. (113 aa)
	PV10_08178	NADH-ubiquinone oxidoreductase 19.3 kDa subunit, mitochondrial; Belongs to the complex I 20 kDa subunit family. (232 aa)
	PV10_07333	Uncharacterized protein. (320 aa)
	PV10_07467	Uncharacterized protein. (188 aa)
	B0A52_06584	Uncharacterized protein. (63 aa)
	PV10_03451	Uncharacterized protein. (367 aa)
	PV10_00193	Uncharacterized protein. (103 aa)
	PV10_00336	Uncharacterized protein; Belongs to the complex I LYR family. (106 aa)
	PV10_00823	Uncharacterized protein. (825 aa)
	PV10_00973	Uncharacterized protein. (84 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_06584	B0A52_07543	A0A0D1XS35	A0A0D1ZL52	Uncharacterized protein.	Cytochrome c1, heme protein, mitochondrial.	0.662
B0A52_06584	PV10_00193	A0A0D1XS35	A0A0D1Y6H1	Uncharacterized protein.	Uncharacterized protein.	0.571
B0A52_06584	PV10_00253	A0A0D1XS35	A0A0D1ZP13	Uncharacterized protein.	Uncharacterized protein.	0.872
B0A52_06584	PV10_00300	A0A0D1XS35	A0A0D2ABY2	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.	0.952
B0A52_06584	PV10_00336	A0A0D1XS35	A0A0D1Y6X9	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.833
B0A52_06584	PV10_00973	A0A0D1XS35	A0A0D1Y930	Uncharacterized protein.	Uncharacterized protein.	0.970
B0A52_06584	PV10_01226	A0A0D1XS35	A0A0D1X6M6	Uncharacterized protein.	Uncharacterized protein.	0.571
B0A52_06584	PV10_01625	A0A0D1XS35	A0A0D1ZVC2	Uncharacterized protein.	Uncharacterized protein.	0.577
B0A52_06584	PV10_01882	A0A0D1XS35	A0A0D1YBZ1	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.895
B0A52_06584	PV10_03219	A0A0D1XS35	A0A0D1ZLV8	Uncharacterized protein.	Uncharacterized protein.	0.875
B0A52_06584	PV10_04268	A0A0D1XS35	A0A0D2A1Y1	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.966
B0A52_06584	PV10_04442	A0A0D1XS35	A0A0D1ZEQ1	Uncharacterized protein.	Uncharacterized protein.	0.931
B0A52_06584	PV10_04711	A0A0D1XS35	A0A0D1WVY6	Uncharacterized protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.889
B0A52_06584	PV10_05556	A0A0D1XS35	A0A0D1ZW07	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.970
B0A52_06584	PV10_05634	A0A0D1XS35	A0A0D1ZAR3	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.933
B0A52_06584	PV10_05759	A0A0D1XS35	A0A0D1WQ57	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.922
B0A52_06584	PV10_06441	A0A0D1XS35	A0A0D1WS02	Uncharacterized protein.	Uncharacterized protein.	0.930
B0A52_06584	PV10_06625	A0A0D1XS35	A0A0D1ZDZ8	Uncharacterized protein.	NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.	0.808
B0A52_06584	PV10_06696	A0A0D1XS35	A0A0D1ZE58	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.893
B0A52_06584	PV10_06848	A0A0D1XS35	A0A0D1ZRR4	Uncharacterized protein.	Uncharacterized protein.	0.767