STRINGSTRING
PV10_07087 PV10_07087 PV10_07753 PV10_07753 PV10_05370 PV10_05370 PV10_05811 PV10_05811 PV10_05897 PV10_05897 PV10_05972 PV10_05972 B0A52_02609 B0A52_02609 PV10_04135 PV10_04135 PV10_04433 PV10_04433 PV10_04587 PV10_04587 PV10_02580 PV10_02580 PV10_03511 PV10_03511 PV10_03603 PV10_03603 PV10_00198 PV10_00198 PV10_00274 PV10_00274 PV10_00388 PV10_00388 PV10_06920 PV10_06920 B0A52_01817 B0A52_01817 PV10_08543 PV10_08543 B0A52_01643 B0A52_01643 PV10_06838 PV10_06838 PV10_06724 PV10_06724 PV10_06375 PV10_06375 PV10_04003 PV10_04003 PV10_06445 PV10_06445 PV10_06736 PV10_06736 PV10_04282 PV10_04282 PV10_03751 PV10_03751 PV10_04759 PV10_04759 PV10_04035 PV10_04035 PV10_04098 PV10_04098 PV10_04961 PV10_04961 PV10_05091 PV10_05091 B0A52_09440 B0A52_09440 PV10_02098 PV10_02098 PV10_03006 PV10_03006 PV10_02682 PV10_02682 PV10_03478 PV10_03478 PV10_03205 PV10_03205 PV10_00204 PV10_00204 PV10_03370 PV10_03370 PV10_00359 PV10_00359 PV10_00436 PV10_00436 PV10_00033 PV10_00033 PV10_07024 PV10_07024 PV10_01452 PV10_01452 PV10_01662 PV10_01662 PV10_01196 PV10_01196 PV10_01615 PV10_01615 PV10_01834 PV10_01834 PV10_05633 PV10_05633 PV10_06117 PV10_06117 PV10_06374 PV10_06374 PV10_04069 PV10_04069 PV10_04499 PV10_04499 PV10_05032 PV10_05032 PV10_05062 PV10_05062 PV10_02041 PV10_02041 PV10_00205 PV10_00205 PV10_01598 PV10_01598 PV10_06904 PV10_06904 PV10_08779 PV10_08779 PV10_08535 PV10_08535 PV10_01121 PV10_01121 PV10_00523 PV10_00523 PV10_05212 PV10_05212 PV10_05064 PV10_05064 PV10_03752 PV10_03752 PV10_03730 PV10_03730 PV10_06482 PV10_06482 PV10_06381 PV10_06381 PV10_05871 PV10_05871 PV10_05438 PV10_05438 PV10_07591 PV10_07591 PV10_06913 PV10_06913 PV10_08668 PV10_08668 PV10_08517 PV10_08517
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_07087DNA polymerase. (1453 aa)
PV10_07753DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (507 aa)
PV10_05370DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (297 aa)
PV10_05811Uncharacterized protein. (1242 aa)
PV10_05897CYCLIN domain-containing protein; Belongs to the cyclin family. (403 aa)
PV10_05972Uncharacterized protein. (283 aa)
B0A52_02609S1 domain-containing protein. (169 aa)
PV10_04135RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (567 aa)
PV10_04433DUF3591 domain-containing protein. (1125 aa)
PV10_04587Uncharacterized protein. (567 aa)
PV10_02580Uncharacterized protein. (621 aa)
PV10_03511Uncharacterized protein. (453 aa)
PV10_03603DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1262 aa)
PV10_00198Uncharacterized protein. (374 aa)
PV10_00274Plus3 domain-containing protein. (606 aa)
PV10_00388Uncharacterized protein. (78 aa)
PV10_06920Uncharacterized protein. (1309 aa)
B0A52_01817RPOL4c domain-containing protein. (152 aa)
PV10_08543Uncharacterized protein. (386 aa)
B0A52_01643Uncharacterized protein. (152 aa)
PV10_06838TFIID_20kDa domain-containing protein. (599 aa)
PV10_06724DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
PV10_06375TAFII55_N domain-containing protein. (747 aa)
PV10_04003TAF domain-containing protein. (447 aa)
PV10_06445DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1218 aa)
PV10_06736Uncharacterized protein. (846 aa)
PV10_04282TAFII28 domain-containing protein. (348 aa)
PV10_03751Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
PV10_04759DUF4211 domain-containing protein. (650 aa)
PV10_04035General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (463 aa)
PV10_04098DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1222 aa)
PV10_04961RPOLD domain-containing protein. (337 aa)
PV10_05091Uncharacterized protein. (448 aa)
B0A52_09440Uncharacterized protein. (238 aa)
PV10_02098RING-type domain-containing protein. (269 aa)
PV10_03006RNA_pol_L_2 domain-containing protein. (122 aa)
PV10_02682DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1742 aa)
PV10_03478DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1761 aa)
PV10_03205Acyl_transf_3 domain-containing protein. (466 aa)
PV10_00204DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1591 aa)
PV10_03370RPA43_OB domain-containing protein. (475 aa)
PV10_00359Uncharacterized protein. (422 aa)
PV10_00436RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (508 aa)
PV10_00033Uncharacterized protein. (608 aa)
PV10_07024Uncharacterized protein. (556 aa)
PV10_01452Uncharacterized protein. (523 aa)
PV10_01662Uncharacterized protein. (634 aa)
PV10_01196Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (705 aa)
PV10_01615Uncharacterized protein. (372 aa)
PV10_01834UmuC domain-containing protein. (603 aa)
PV10_05633RNA_pol_L_2 domain-containing protein. (129 aa)
PV10_06117Uncharacterized protein. (478 aa)
PV10_06374BTP domain-containing protein. (236 aa)
PV10_04069Uncharacterized protein. (776 aa)
PV10_04499DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (654 aa)
PV10_05032Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (239 aa)
PV10_05062Uncharacterized protein. (363 aa)
PV10_02041Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (422 aa)
PV10_00205TAF8_C domain-containing protein. (323 aa)
PV10_01598TFIIE beta domain-containing protein. (233 aa)
PV10_06904Med12 domain-containing protein. (1500 aa)
PV10_08779DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
PV10_08535Uncharacterized protein. (487 aa)
PV10_01121Uncharacterized protein. (373 aa)
PV10_00523DNA primase; Belongs to the eukaryotic-type primase small subunit family. (530 aa)
PV10_05212Uncharacterized protein. (265 aa)
PV10_05064DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1427 aa)
PV10_03752Uncharacterized protein. (350 aa)
PV10_03730Uncharacterized protein. (267 aa)
PV10_06482HTH TFE/IIEalpha-type domain-containing protein. (487 aa)
PV10_06381DNA-directed RNA polymerase. (196 aa)
PV10_05871Uncharacterized protein. (215 aa)
PV10_05438Uncharacterized protein. (348 aa)
PV10_07591RPOLD domain-containing protein. (373 aa)
PV10_06913CDC73_C domain-containing protein. (446 aa)
PV10_08668WD_REPEATS_REGION domain-containing protein. (316 aa)
PV10_08517BRCT domain-containing protein. (714 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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