5 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B0A52_08158	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	PV10_00555	Uncharacterized protein. (291 aa)
	B0A52_10116	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	PV10_05684	Uncharacterized protein. (160 aa)
	PV10_06919	Small nuclear ribonucleoprotein G. (81 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_08158	B0A52_10116	A0A0D1WWG2	A0A0D2A2E0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D3.	0.999
B0A52_08158	PV10_00555	A0A0D1WWG2	A0A0D1ZRY3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.995
B0A52_08158	PV10_05684	A0A0D1WWG2	A0A0D1ZAU8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.995
B0A52_08158	PV10_06919	A0A0D1WWG2	A0A0D1XN41	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein G.	0.999
B0A52_10116	B0A52_08158	A0A0D2A2E0	A0A0D1WWG2	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
B0A52_10116	PV10_00555	A0A0D2A2E0	A0A0D1ZRY3	Small nuclear ribonucleoprotein Sm D3.	Uncharacterized protein.	0.991
B0A52_10116	PV10_05684	A0A0D2A2E0	A0A0D1ZAU8	Small nuclear ribonucleoprotein Sm D3.	Uncharacterized protein.	0.991
B0A52_10116	PV10_06919	A0A0D2A2E0	A0A0D1XN41	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.999
PV10_00555	B0A52_08158	A0A0D1ZRY3	A0A0D1WWG2	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.995
PV10_00555	B0A52_10116	A0A0D1ZRY3	A0A0D2A2E0	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.991
PV10_00555	PV10_06919	A0A0D1ZRY3	A0A0D1XN41	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.995
PV10_05684	B0A52_08158	A0A0D1ZAU8	A0A0D1WWG2	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.995
PV10_05684	B0A52_10116	A0A0D1ZAU8	A0A0D2A2E0	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.991
PV10_05684	PV10_06919	A0A0D1ZAU8	A0A0D1XN41	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.995
PV10_06919	B0A52_08158	A0A0D1XN41	A0A0D1WWG2	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
PV10_06919	B0A52_10116	A0A0D1XN41	A0A0D2A2E0	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3.	0.999
PV10_06919	PV10_00555	A0A0D1XN41	A0A0D1ZRY3	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.995
PV10_06919	PV10_05684	A0A0D1XN41	A0A0D1ZAU8	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.995