30 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_04131	Metallophos domain-containing protein. (433 aa)
	PV10_03763	Serine/threonine-protein phosphatase. (329 aa)
	PV10_04387	Uncharacterized protein. (227 aa)
	PV10_04854	Protein kinase domain-containing protein. (667 aa)
	PV10_00317	Uncharacterized protein. (469 aa)
	B0A52_00628	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (355 aa)
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV10_05913	TYR_PHOSPHATASE_2 domain-containing protein. (414 aa)
	PV10_03754	Uncharacterized protein. (549 aa)
	PV10_09045	Uncharacterized protein. (815 aa)
	PV10_08298	Uncharacterized protein. (320 aa)
	PV10_09061	Vac14_Fab1_bd domain-containing protein. (620 aa)
	PV10_01851	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (370 aa)
	PV10_00535	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (412 aa)
	PV10_00096	BZIP domain-containing protein. (512 aa)
	PV10_04606	BZIP domain-containing protein. (337 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	PV10_00046	Uncharacterized protein. (219 aa)
	PV10_00655	Protein kinase domain-containing protein. (546 aa)
	PV10_05253	Zn(2)-C6 fungal-type domain-containing protein. (770 aa)
	PV10_05313	Uncharacterized protein. (268 aa)
	PV10_05809	Uncharacterized protein. (635 aa)
	PV10_05060	Uncharacterized protein. (201 aa)
	B0A52_05644	Protein kinase domain-containing protein. (306 aa)
	PV10_05504	Uncharacterized protein. (408 aa)
	PV10_06821	APH domain-containing protein. (308 aa)
	PV10_08963	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (493 aa)
	PV10_00087	Uncharacterized protein. (476 aa)
	PV10_03207	Polyubiquitin. (229 aa)
	PV10_02991	Uncharacterized protein. (165 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00628	B0A52_00659	A0A0D1ZQG4	A0A0D1ZQI9	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ubiquitin-40S ribosomal protein S27a.	0.479
B0A52_00628	B0A52_05644	A0A0D1ZQG4	A0A0D1XIH1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein kinase domain-containing protein.	0.425
B0A52_00628	PV10_00046	A0A0D1ZQG4	A0A0D2AB38	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.789
B0A52_00628	PV10_00087	A0A0D1ZQG4	A0A0D1Y679	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.425
B0A52_00628	PV10_00096	A0A0D1ZQG4	A0A0D1Y691	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	BZIP domain-containing protein.	0.797
B0A52_00628	PV10_00317	A0A0D1ZQG4	A0A0D1ZPC6	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.797
B0A52_00628	PV10_00535	A0A0D1ZQG4	A0A0D1Y7J6	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.681
B0A52_00628	PV10_00655	A0A0D1ZQG4	A0A0D2AD33	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein kinase domain-containing protein.	0.993
B0A52_00628	PV10_01851	A0A0D1ZQG4	A0A0D1YBW9	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.836
B0A52_00628	PV10_02991	A0A0D1ZQG4	A0A0D1Y3S5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.650
B0A52_00628	PV10_03207	A0A0D1ZQG4	A0A0D1Y4J0	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Polyubiquitin.	0.459
B0A52_00628	PV10_03763	A0A0D1ZQG4	A0A0D1ZF22	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Serine/threonine-protein phosphatase.	0.718
B0A52_00628	PV10_04131	A0A0D1ZQG4	A0A0D1ZDS9	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Metallophos domain-containing protein.	0.700
B0A52_00628	PV10_04387	A0A0D1ZQG4	A0A0D1ZH71	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.793
B0A52_00628	PV10_04606	A0A0D1ZQG4	A0A0D2A2Y1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	BZIP domain-containing protein.	0.808
B0A52_00628	PV10_04854	A0A0D1ZQG4	A0A0D1ZID9	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein kinase domain-containing protein.	0.894
B0A52_00628	PV10_05060	A0A0D1ZQG4	A0A0D1Y041	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.707
B0A52_00628	PV10_05253	A0A0D1ZQG4	A0A0D2A529	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Zn(2)-C6 fungal-type domain-containing protein.	0.425
B0A52_00628	PV10_05504	A0A0D1ZQG4	A0A0D1WPC0	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.707
B0A52_00628	PV10_05809	A0A0D1ZQG4	A0A0D1ZB83	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.727