23 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_02155	Uncharacterized protein. (407 aa)
	PV10_05217	MaoC-like domain-containing protein. (353 aa)
	PV10_08709	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (457 aa)
	PV10_08095	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (697 aa)
	PV10_09104	Uncharacterized protein. (585 aa)
	B0A52_06643	SCP2 domain-containing protein. (129 aa)
	PV10_08263	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)
	PV10_02815	Acyl-CoA thioesterase II. (337 aa)
	PV10_01976	Acyl-CoA thioesterase II. (261 aa)
	PV10_08647	Uncharacterized protein. (574 aa)
	PV10_07160	Uncharacterized protein. (321 aa)
	PV10_07077	Peroxisomal hydratase-dehydrogenase-epimerase. (901 aa)
	PV10_08734	Uncharacterized protein. (598 aa)
	PV10_00589	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (460 aa)
	PV10_01904	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (646 aa)
	PV10_00645	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (698 aa)
	PV10_00298	Uncharacterized protein. (460 aa)
	PV10_02847	Uncharacterized protein. (398 aa)
	PV10_06603	Uncharacterized protein. (388 aa)
	PV10_07459	Uncharacterized protein. (491 aa)
	PV10_01929	Uncharacterized protein. (417 aa)
	PV10_03476	Acyl-CoA thioesterase II. (377 aa)
	PV10_04805	Acyl-CoA thioesterase II. (397 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_06643	PV10_00298	A0A0D2AAY2	A0A0D1Y6R7	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_00589	A0A0D2AAY2	A0A0D2ACU1	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.817
B0A52_06643	PV10_00645	A0A0D2AAY2	A0A0D2AD18	SCP2 domain-containing protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.885
B0A52_06643	PV10_01904	A0A0D2AAY2	A0A0D1YC12	SCP2 domain-containing protein.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.831
B0A52_06643	PV10_01929	A0A0D2AAY2	A0A0D1ZUQ2	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_02155	A0A0D2AAY2	A0A0D2A5X4	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_02847	A0A0D2AAY2	A0A0D1Y3G8	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_05217	A0A0D2AAY2	A0A0D1WXF0	SCP2 domain-containing protein.	MaoC-like domain-containing protein.	0.634
B0A52_06643	PV10_06603	A0A0D2AAY2	A0A0D1XV59	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_07077	A0A0D2AAY2	A0A0D1Z4I6	SCP2 domain-containing protein.	Peroxisomal hydratase-dehydrogenase-epimerase.	0.837
B0A52_06643	PV10_07160	A0A0D2AAY2	A0A0D1Z4Q5	SCP2 domain-containing protein.	Uncharacterized protein.	0.574
B0A52_06643	PV10_07459	A0A0D2AAY2	A0A0D1ZTL2	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_08095	A0A0D2AAY2	A0A0D1WHW6	SCP2 domain-containing protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.885
B0A52_06643	PV10_08263	A0A0D2AAY2	A0A0D1ZPA6	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.817
B0A52_06643	PV10_08647	A0A0D2AAY2	A0A0D1Z576	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_08709	A0A0D2AAY2	A0A0D1WJR0	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.817
B0A52_06643	PV10_08734	A0A0D2AAY2	A0A0D1Z2Z3	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_09104	A0A0D2AAY2	A0A0D1WH94	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
PV10_00298	B0A52_06643	A0A0D1Y6R7	A0A0D2AAY2	Uncharacterized protein.	SCP2 domain-containing protein.	0.634
PV10_00298	PV10_00589	A0A0D1Y6R7	A0A0D2ACU1	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.599