14 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV10_05180	AAA domain-containing protein. (1122 aa)
	PV10_04229	Uncharacterized protein. (444 aa)
	PV10_04579	Uncharacterized protein. (132 aa)
	PV10_06484	Zds_C domain-containing protein. (930 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	PV10_08112	Uncharacterized protein. (158 aa)
	PV10_03207	Polyubiquitin. (229 aa)
	PV10_03294	Uncharacterized protein. (790 aa)
	PV10_07405	Zn(2)-C6 fungal-type domain-containing protein. (691 aa)
	PV10_02688	Uncharacterized protein. (507 aa)
	PV10_04153	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1162 aa)
	PV10_01834	UmuC domain-containing protein. (603 aa)
	PV10_07844	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (607 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00659	PV10_01834	A0A0D1ZQI9	A0A0D1ZVW9	Ubiquitin-40S ribosomal protein S27a.	UmuC domain-containing protein.	0.898
B0A52_00659	PV10_02688	A0A0D1ZQI9	A0A0D2A7N4	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_03207	A0A0D1ZQI9	A0A0D1Y4J0	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.969
B0A52_00659	PV10_03294	A0A0D1ZQI9	A0A0D1X1M7	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_04153	A0A0D1ZQI9	A0A0D2A1H0	Ubiquitin-40S ribosomal protein S27a.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.833
B0A52_00659	PV10_04229	A0A0D1ZQI9	A0A0D1ZGR5	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_04579	A0A0D1ZQI9	A0A0D1ZF32	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_05180	A0A0D1ZQI9	A0A0D1ZHE5	Ubiquitin-40S ribosomal protein S27a.	AAA domain-containing protein.	0.632
B0A52_00659	PV10_06484	A0A0D1ZQI9	A0A0D1ZBF9	Ubiquitin-40S ribosomal protein S27a.	Zds_C domain-containing protein.	0.461
B0A52_00659	PV10_07405	A0A0D1ZQI9	A0A0D1WM61	Ubiquitin-40S ribosomal protein S27a.	Zn(2)-C6 fungal-type domain-containing protein.	0.833
B0A52_00659	PV10_07844	A0A0D1ZQI9	A0A0D1ZUU4	Ubiquitin-40S ribosomal protein S27a.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.633
B0A52_00659	PV10_08112	A0A0D1ZQI9	A0A0D1Z0U6	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
PV10_01834	B0A52_00659	A0A0D1ZVW9	A0A0D1ZQI9	UmuC domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.898
PV10_01834	PV10_03207	A0A0D1ZVW9	A0A0D1Y4J0	UmuC domain-containing protein.	Polyubiquitin.	0.942
PV10_01834	PV10_04153	A0A0D1ZVW9	A0A0D2A1H0	UmuC domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.897
PV10_01834	PV10_05180	A0A0D1ZVW9	A0A0D1ZHE5	UmuC domain-containing protein.	AAA domain-containing protein.	0.619
PV10_01834	PV10_07405	A0A0D1ZVW9	A0A0D1WM61	UmuC domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.884
PV10_01834	PV10_07844	A0A0D1ZVW9	A0A0D1ZUU4	UmuC domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.669
PV10_01834	PV10_08689	A0A0D1ZVW9	A0A0D1Z5B3	UmuC domain-containing protein.	BZIP domain-containing protein.	0.898
PV10_02688	B0A52_00659	A0A0D2A7N4	A0A0D1ZQI9	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.461