77 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_00847	Uncharacterized protein. (239 aa)
	PV10_00120	PCI domain-containing protein. (386 aa)
	B0A52_00610	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (422 aa)
	PV10_02975	Proteasome subunit alpha type. (297 aa)
	PV10_02502	Uncharacterized protein. (526 aa)
	B0A52_02785	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (393 aa)
	PV10_02371	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (245 aa)
	B0A52_01864	Proteasome subunit alpha type. (251 aa)
	PV10_07570	Uncharacterized protein. (177 aa)
	PV10_07338	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (216 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	B0A52_07919	Proteasome subunit beta. (206 aa)
	PV10_06925	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (635 aa)
	PV10_08352	Uncharacterized protein. (988 aa)
	PV10_08055	PCI domain-containing protein. (492 aa)
	PV10_09186	Uncharacterized protein. (298 aa)
	PV10_01841	Uncharacterized protein. (1974 aa)
	PV10_01821	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (457 aa)
	PV10_01365	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (466 aa)
	B0A52_08442	Proteasome subunit alpha type. (279 aa)
	B0A52_00830	Proteasome subunit alpha type. (254 aa)
	PV10_00237	USP domain-containing protein; Belongs to the peptidase C19 family. (520 aa)
	PV10_03207	Polyubiquitin. (229 aa)
	B0A52_09259	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (439 aa)
	PV10_00239	PCI domain-containing protein. (576 aa)
	PV10_03307	PCI domain-containing protein. (481 aa)
	PV10_03104	SCA7 domain-containing protein. (384 aa)
	PV10_02070	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1148 aa)
	PV10_05110	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (906 aa)
	PV10_04992	Uncharacterized protein. (172 aa)
	B0A52_02104	26S proteasome regulatory subunit rpn11. (338 aa)
	PV10_03762	Uncharacterized protein. (370 aa)
	PV10_03754	Uncharacterized protein. (549 aa)
	PV10_06600	Uncharacterized protein. (1446 aa)
	PV10_06664	VWFA domain-containing protein. (309 aa)
	PV10_06327	Uncharacterized protein. (1113 aa)
	B0A52_06478	Proteasome subunit alpha type. (262 aa)
	PV10_07900	Pr_beta_C domain-containing protein. (281 aa)
	PV10_07516	Uncharacterized protein; Belongs to the peptidase C19 family. (1529 aa)
	PV10_07304	Uncharacterized protein. (380 aa)
	B0A52_01655	26S protease regulatory subunit 8 A; Belongs to the AAA ATPase family. (389 aa)
	PV10_02120	Proteasome subunit beta; Belongs to the peptidase T1B family. (262 aa)
	PV10_04947	F-box domain-containing protein. (1134 aa)
	PV10_04342	Proteasome subunit beta. (283 aa)
	PV10_04145	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3814 aa)
	PV10_06325	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (687 aa)
	PV10_05899	AAA domain-containing protein; Belongs to the AAA ATPase family. (463 aa)
	PV10_07655	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (531 aa)
	PV10_01371	RPN13_C domain-containing protein. (392 aa)
	B0A52_09270	Proteasome subunit alpha type. (246 aa)
	B0A52_00854	Histone H2B; Belongs to the histone H2B family. (140 aa)
	PV10_00844	Uncharacterized protein. (474 aa)
	PV10_00828	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (494 aa)
	PV10_08652	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (246 aa)
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV10_00605	PCI domain-containing protein. (276 aa)
	PV10_00406	Uncharacterized protein. (656 aa)
	PV10_00392	Uncharacterized protein. (618 aa)
	PV10_03113	RING-type domain-containing protein. (422 aa)
	PV10_02962	Ubiquitin carboxyl-terminal hydrolase. (586 aa)
	PV10_09185	26S proteasome regulatory subunit rpn-8. (353 aa)
	B0A52_02956	PCI domain-containing protein. (421 aa)
	PV10_02586	USP domain-containing protein; Belongs to the peptidase C19 family. (677 aa)
	PV10_02368	Proteasome subunit beta. (241 aa)
	PV10_02330	Uncharacterized protein. (264 aa)
	PV10_04505	USP domain-containing protein; Belongs to the peptidase C19 family. (652 aa)
	B0A52_04839	Proteasome subunit alpha type. (272 aa)
	PV10_04005	dTDP-4-dehydrorhamnose reductase. (315 aa)
	PV10_06497	USP domain-containing protein; Belongs to the peptidase C19 family. (2541 aa)
	PV10_06349	WD_REPEATS_REGION domain-containing protein. (635 aa)
	B0A52_07530	Proteasome subunit beta. (231 aa)
	PV10_04125	Uncharacterized protein. (344 aa)
	PV10_06225	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (169 aa)
	PV10_05760	USP domain-containing protein. (785 aa)
	PV10_05479	Ubiquitin carboxyl-terminal hydrolase. (578 aa)
	PV10_05383	Uncharacterized protein. (842 aa)
	PV10_07892	Ubiquitin carboxyl-terminal hydrolase. (796 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00610	B0A52_00659	A0A0D1X346	A0A0D1ZQI9	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Ubiquitin-40S ribosomal protein S27a.	0.921
B0A52_00610	B0A52_00830	A0A0D1X346	A0A0D1Y6T0	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.999
B0A52_00610	B0A52_01655	A0A0D1X346	A0A0D1WLN0	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8 A; Belongs to the AAA ATPase family.	0.999
B0A52_00610	B0A52_01864	A0A0D1X346	A0A0D1Z6E7	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.996
B0A52_00610	B0A52_02104	A0A0D1X346	A0A0D2A3T4	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit rpn11.	0.999
B0A52_00610	B0A52_02785	A0A0D1X346	A0A0D1WYY1	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	0.999
B0A52_00610	B0A52_02956	A0A0D1X346	A0A0D1ZK49	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
B0A52_00610	B0A52_04839	A0A0D1X346	A0A0D1ZGY5	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.998
B0A52_00610	B0A52_06478	A0A0D1X346	A0A0D1WPT3	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.996
B0A52_00610	B0A52_07530	A0A0D1X346	A0A0D1Y3V4	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Proteasome subunit beta.	0.997
B0A52_00610	B0A52_07919	A0A0D1X346	A0A0D1WYE1	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Proteasome subunit beta.	0.998
B0A52_00610	B0A52_08442	A0A0D1X346	A0A0D1Y8X2	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.997
B0A52_00610	B0A52_09259	A0A0D1X346	A0A0D1Y4D6	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
B0A52_00610	B0A52_09270	A0A0D1X346	A0A0D1ZRY0	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.998
B0A52_00610	PV10_00120	A0A0D1X346	A0A0D1X365	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.998
B0A52_00610	PV10_00239	A0A0D1X346	A0A0D2ABQ5	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.957
B0A52_00610	PV10_00605	A0A0D1X346	A0A0D1ZQ95	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
B0A52_00610	PV10_00844	A0A0D1X346	A0A0D1ZR37	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.929
B0A52_00610	PV10_00847	A0A0D1X346	A0A0D1X5L8	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.976
B0A52_00610	PV10_01365	A0A0D1X346	A0A0D1YAI7	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.999