STRINGSTRING
PV10_00247 PV10_00247 PV10_01431 PV10_01431 PV10_00894 PV10_00894 PV10_00276 PV10_00276 PV10_02688 PV10_02688 PV10_02427 PV10_02427 PV10_02041 PV10_02041 PV10_05118 PV10_05118 PV10_04949 PV10_04949 PV10_04514 PV10_04514 PV10_04167 PV10_04167 PV10_05818 PV10_05818 PV10_01740 PV10_01740 PV10_07844 PV10_07844 PV10_07655 PV10_07655 PV10_01662 PV10_01662 PV10_07180 PV10_07180 PV10_07161 PV10_07161 B0A52_00659 B0A52_00659 PV10_03616 PV10_03616 PV10_00436 PV10_00436 PV10_03379 PV10_03379 PV10_03478 PV10_03478 PV10_02403 PV10_02403 PV10_03006 PV10_03006 PV10_02711 PV10_02711 PV10_02098 PV10_02098 B0A52_09440 B0A52_09440 PV10_02437 PV10_02437 PV10_04710 PV10_04710 PV10_05180 PV10_05180 PV10_05091 PV10_05091 PV10_04229 PV10_04229 PV10_04961 PV10_04961 PV10_04953 PV10_04953 PV10_04035 PV10_04035 PV10_04579 PV10_04579 PV10_06736 PV10_06736 PV10_06615 PV10_06615 PV10_06302 PV10_06302 PV10_03744 PV10_03744 PV10_06724 PV10_06724 PV10_06587 PV10_06587 PV10_06484 PV10_06484 PV10_05437 PV10_05437 PV10_07723 PV10_07723 PV10_05473 PV10_05473 PV10_08689 PV10_08689 PV10_04771 PV10_04771 PV10_04648 PV10_04648 PV10_07724 PV10_07724 PV10_07274 PV10_07274 B0A52_01643 B0A52_01643 PV10_08598 PV10_08598 B0A52_01817 B0A52_01817 PV10_08487 PV10_08487 PV10_08112 PV10_08112 PV10_01821 PV10_01821 PV10_00388 PV10_00388 PV10_03603 PV10_03603 PV10_03580 PV10_03580 PV10_03207 PV10_03207 PV10_03170 PV10_03170 PV10_02203 PV10_02203 PV10_04957 PV10_04957 PV10_04578 PV10_04578 PV10_06413 PV10_06413 B0A52_02609 B0A52_02609 PV10_06236 PV10_06236 PV10_06162 PV10_06162 PV10_06115 PV10_06115 PV10_05897 PV10_05897 B0A52_07266 B0A52_07266 PV10_05646 PV10_05646 PV10_07396 PV10_07396 PV10_06885 PV10_06885 PV10_09193 PV10_09193 PV10_01835 PV10_01835 PV10_03294 PV10_03294
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_00247Uncharacterized protein. (490 aa)
PV10_01431Replication factor C subunit 1. (1078 aa)
PV10_00894Replication factor C subunit 5. (597 aa)
PV10_00276Uncharacterized protein. (372 aa)
PV10_02688Uncharacterized protein. (507 aa)
PV10_02427Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1419 aa)
PV10_02041Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (422 aa)
PV10_05118Uncharacterized protein. (226 aa)
PV10_04949CPSF_A domain-containing protein. (1184 aa)
PV10_04514Uncharacterized protein. (473 aa)
PV10_04167Uncharacterized protein. (277 aa)
PV10_05818Poly [ADP-ribose] polymerase. (702 aa)
PV10_01740RRM domain-containing protein. (155 aa)
PV10_07844Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (607 aa)
PV10_07655DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (531 aa)
PV10_01662Uncharacterized protein. (634 aa)
PV10_07180PCI domain-containing protein. (424 aa)
PV10_07161PCI domain-containing protein. (484 aa)
B0A52_00659Ubiquitin-40S ribosomal protein S27a. (154 aa)
PV10_03616PCI domain-containing protein. (323 aa)
PV10_00436RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (508 aa)
PV10_03379Uncharacterized protein. (985 aa)
PV10_03478DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1761 aa)
PV10_02403UmuC domain-containing protein. (723 aa)
PV10_03006RNA_pol_L_2 domain-containing protein. (122 aa)
PV10_02711DNA repair helicase rad15. (818 aa)
PV10_02098RING-type domain-containing protein. (269 aa)
B0A52_09440Uncharacterized protein. (238 aa)
PV10_02437Uncharacterized protein. (1343 aa)
PV10_04710CBFD_NFYB_HMF domain-containing protein. (185 aa)
PV10_05180AAA domain-containing protein. (1122 aa)
PV10_05091Uncharacterized protein. (448 aa)
PV10_04229Uncharacterized protein. (444 aa)
PV10_04961RPOLD domain-containing protein. (337 aa)
PV10_04953YL1_C domain-containing protein. (209 aa)
PV10_04035General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (463 aa)
PV10_04579Uncharacterized protein. (132 aa)
PV10_06736Uncharacterized protein. (846 aa)
PV10_06615Uncharacterized protein; Belongs to the peptidase C19 family. (1131 aa)
PV10_06302Uncharacterized protein. (556 aa)
PV10_03744Uncharacterized protein. (251 aa)
PV10_06724DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
PV10_06587AAA domain-containing protein. (406 aa)
PV10_06484Zds_C domain-containing protein. (930 aa)
PV10_05437MPN domain-containing protein. (468 aa)
PV10_07723Uncharacterized protein. (327 aa)
PV10_05473ERCC4 domain-containing protein. (948 aa)
PV10_08689BZIP domain-containing protein. (291 aa)
PV10_04771MPN domain-containing protein. (370 aa)
PV10_04648Pre-mRNA-splicing factor syf1. (862 aa)
PV10_07724Uncharacterized protein. (839 aa)
PV10_07274Uncharacterized protein. (1195 aa)
B0A52_01643Uncharacterized protein. (152 aa)
PV10_08598PCI domain-containing protein. (519 aa)
B0A52_01817RPOL4c domain-containing protein. (152 aa)
PV10_08487Uncharacterized protein. (377 aa)
PV10_08112Uncharacterized protein. (158 aa)
PV10_01821RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (457 aa)
PV10_00388Uncharacterized protein. (78 aa)
PV10_03603DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1262 aa)
PV10_03580Uncharacterized protein. (1124 aa)
PV10_03207Polyubiquitin. (229 aa)
PV10_03170USP domain-containing protein; Belongs to the peptidase C19 family. (1346 aa)
PV10_02203WD_REPEATS_REGION domain-containing protein. (521 aa)
PV10_04957Uncharacterized protein; Belongs to the actin family. (765 aa)
PV10_04578CULLIN_2 domain-containing protein; Belongs to the cullin family. (896 aa)
PV10_06413DNA repair protein. (364 aa)
B0A52_02609S1 domain-containing protein. (169 aa)
PV10_06236Transcription elongation factor S-II, variant. (306 aa)
PV10_06162UV excision repair protein Rad23. (398 aa)
PV10_06115Uncharacterized protein. (1674 aa)
PV10_05897CYCLIN domain-containing protein; Belongs to the cyclin family. (403 aa)
B0A52_07266RING-box protein 1. (124 aa)
PV10_05646Replication factor C subunit 4. (352 aa)
PV10_07396AAA domain-containing protein. (397 aa)
PV10_06885Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (723 aa)
PV10_09193BRCT domain-containing protein. (497 aa)
PV10_01835Uncharacterized protein. (244 aa)
PV10_03294Uncharacterized protein. (790 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.