20 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_03207	Polyubiquitin. (229 aa)
	PV10_05118	Uncharacterized protein. (226 aa)
	PV10_02688	Uncharacterized protein. (507 aa)
	PV10_04949	CPSF_A domain-containing protein. (1184 aa)
	PV10_02437	Uncharacterized protein. (1343 aa)
	PV10_02403	UmuC domain-containing protein. (723 aa)
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV10_07844	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (607 aa)
	PV10_05818	Poly [ADP-ribose] polymerase. (702 aa)
	PV10_03294	Uncharacterized protein. (790 aa)
	B0A52_07266	RING-box protein 1. (124 aa)
	PV10_04578	CULLIN_2 domain-containing protein; Belongs to the cullin family. (896 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	PV10_05473	ERCC4 domain-containing protein. (948 aa)
	PV10_06484	Zds_C domain-containing protein. (930 aa)
	PV10_04579	Uncharacterized protein. (132 aa)
	PV10_04229	Uncharacterized protein. (444 aa)
	PV10_04710	CBFD_NFYB_HMF domain-containing protein. (185 aa)
	PV10_08487	Uncharacterized protein. (377 aa)
	PV10_08112	Uncharacterized protein. (158 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00659	B0A52_07266	A0A0D1ZQI9	A0A0D1XSV6	Ubiquitin-40S ribosomal protein S27a.	RING-box protein 1.	0.912
B0A52_00659	PV10_02403	A0A0D1ZQI9	A0A0D1ZL38	Ubiquitin-40S ribosomal protein S27a.	UmuC domain-containing protein.	0.755
B0A52_00659	PV10_02437	A0A0D1ZQI9	A0A0D1ZJ95	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.624
B0A52_00659	PV10_02688	A0A0D1ZQI9	A0A0D2A7N4	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_03207	A0A0D1ZQI9	A0A0D1Y4J0	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.969
B0A52_00659	PV10_03294	A0A0D1ZQI9	A0A0D1X1M7	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_04229	A0A0D1ZQI9	A0A0D1ZGR5	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_04578	A0A0D1ZQI9	A0A0D1XYP1	Ubiquitin-40S ribosomal protein S27a.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.785
B0A52_00659	PV10_04579	A0A0D1ZQI9	A0A0D1ZF32	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_04949	A0A0D1ZQI9	A0A0D2A430	Ubiquitin-40S ribosomal protein S27a.	CPSF_A domain-containing protein.	0.778
B0A52_00659	PV10_05473	A0A0D1ZQI9	A0A0D1Z7W0	Ubiquitin-40S ribosomal protein S27a.	ERCC4 domain-containing protein.	0.681
B0A52_00659	PV10_05818	A0A0D1ZQI9	A0A0D1ZWR6	Ubiquitin-40S ribosomal protein S27a.	Poly [ADP-ribose] polymerase.	0.692
B0A52_00659	PV10_06484	A0A0D1ZQI9	A0A0D1ZBF9	Ubiquitin-40S ribosomal protein S27a.	Zds_C domain-containing protein.	0.461
B0A52_00659	PV10_07844	A0A0D1ZQI9	A0A0D1ZUU4	Ubiquitin-40S ribosomal protein S27a.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.633
B0A52_00659	PV10_08112	A0A0D1ZQI9	A0A0D1Z0U6	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.461
B0A52_00659	PV10_08487	A0A0D1ZQI9	A0A0D1Z4J4	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.752
B0A52_07266	B0A52_00659	A0A0D1XSV6	A0A0D1ZQI9	RING-box protein 1.	Ubiquitin-40S ribosomal protein S27a.	0.912
B0A52_07266	PV10_02437	A0A0D1XSV6	A0A0D1ZJ95	RING-box protein 1.	Uncharacterized protein.	0.658
B0A52_07266	PV10_03207	A0A0D1XSV6	A0A0D1Y4J0	RING-box protein 1.	Polyubiquitin.	0.936
B0A52_07266	PV10_04578	A0A0D1XSV6	A0A0D1XYP1	RING-box protein 1.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.982