87 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_02041	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (422 aa)
	PV10_09170	CID domain-containing protein. (657 aa)
	PV10_07937	Uncharacterized protein. (428 aa)
	PV10_08344	Uncharacterized protein. (710 aa)
	PV10_08521	Uncharacterized protein. (909 aa)
	PV10_07162	Uncharacterized protein. (624 aa)
	PV10_07531	CID domain-containing protein. (502 aa)
	PV10_07817	Uncharacterized protein. (830 aa)
	PV10_05366	Fungal_trans domain-containing protein. (714 aa)
	PV10_05522	Serine/threonine-protein kinase bur1. (690 aa)
	PV10_05706	Uncharacterized protein. (697 aa)
	PV10_05769	Uncharacterized protein. (820 aa)
	PV10_05871	Uncharacterized protein. (215 aa)
	PV10_06482	HTH TFE/IIEalpha-type domain-containing protein. (487 aa)
	PV10_03730	Uncharacterized protein. (267 aa)
	PV10_03752	Uncharacterized protein. (350 aa)
	PV10_04925	Uncharacterized protein. (1139 aa)
	PV10_05179	Uncharacterized protein. (832 aa)
	PV10_01979	Uncharacterized protein. (578 aa)
	PV10_02621	Uncharacterized protein. (758 aa)
	PV10_00320	Uncharacterized protein. (894 aa)
	PV10_01121	Uncharacterized protein. (373 aa)
	PV10_09171	C2H2-type domain-containing protein. (1060 aa)
	PV10_08976	Uncharacterized protein. (1014 aa)
	PV10_08159	Uncharacterized protein. (464 aa)
	PV10_08874	C2H2-type domain-containing protein. (935 aa)
	PV10_06831	Uncharacterized protein. (432 aa)
	PV10_07270	Uncharacterized protein. (541 aa)
	PV10_07300	Uncharacterized protein. (783 aa)
	PV10_05569	Uncharacterized protein. (430 aa)
	PV10_05972	Uncharacterized protein. (283 aa)
	B0A52_02609	S1 domain-containing protein. (169 aa)
	PV10_06451	Fungal_trans domain-containing protein. (729 aa)
	PV10_06708	Uncharacterized protein. (249 aa)
	PV10_03784	C2H2-type domain-containing protein. (858 aa)
	PV10_04758	Uncharacterized protein. (703 aa)
	PV10_02612	Uncharacterized protein; Belongs to the cyclin family. (517 aa)
	PV10_03603	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1262 aa)
	PV10_00514	Uncharacterized protein. (956 aa)
	PV10_01049	Fungal_trans domain-containing protein. (884 aa)
	PV10_01859	Uncharacterized protein. (673 aa)
	PV10_08386	Uncharacterized protein. (441 aa)
	B0A52_01817	RPOL4c domain-containing protein. (152 aa)
	PV10_08543	Uncharacterized protein. (386 aa)
	B0A52_01643	Uncharacterized protein. (152 aa)
	PV10_07579	Uncharacterized protein. (354 aa)
	PV10_07636	BTB domain-containing protein. (957 aa)
	PV10_07044	RTR1-type domain-containing protein. (247 aa)
	PV10_05359	Uncharacterized protein. (928 aa)
	PV10_06319	Uncharacterized protein. (981 aa)
	PV10_05850	Isochorismatase domain-containing protein. (200 aa)
	PV10_06724	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
	PV10_06302	Uncharacterized protein. (556 aa)
	PV10_03876	Uncharacterized protein. (353 aa)
	PV10_04003	TAF domain-containing protein. (447 aa)
	PV10_04282	TAFII28 domain-containing protein. (348 aa)
	PV10_03677	Uncharacterized protein. (773 aa)
	PV10_03751	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
	PV10_04759	DUF4211 domain-containing protein. (650 aa)
	PV10_04961	RPOLD domain-containing protein. (337 aa)
	PV10_02247	Uncharacterized protein. (631 aa)
	B0A52_09440	Uncharacterized protein. (238 aa)
	PV10_02896	Uncharacterized protein. (430 aa)
	PV10_03006	RNA_pol_L_2 domain-containing protein. (122 aa)
	PV10_03106	CFEM domain-containing protein. (338 aa)
	PV10_03478	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1761 aa)
	PV10_03205	Acyl_transf_3 domain-containing protein. (466 aa)
	PV10_03471	RNA polymerase II subunit A domain phosphatase ssu72. (321 aa)
	PV10_07034	Uncharacterized protein. (981 aa)
	PV10_00936	Uncharacterized protein; Belongs to the cyclin family. (424 aa)
	PV10_01196	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (705 aa)
	PV10_01321	Uncharacterized protein. (503 aa)
	PV10_07883	Zn(2)-C6 fungal-type domain-containing protein. (242 aa)
	PV10_05386	Uncharacterized protein. (357 aa)
	PV10_05881	Uncharacterized protein. (178 aa)
	PV10_06430	Fungal_trans domain-containing protein. (645 aa)
	PV10_06643	C2H2-type domain-containing protein. (915 aa)
	PV10_04069	Uncharacterized protein. (776 aa)
	PV10_05123	Uncharacterized protein. (1158 aa)
	B0A52_07467	TFIIB-type domain-containing protein. (361 aa)
	PV10_03174	HTH araC/xylS-type domain-containing protein. (354 aa)
	PV10_00143	Uncharacterized protein. (723 aa)
	PV10_00205	TAF8_C domain-containing protein. (323 aa)
	PV10_00778	Fungal_trans domain-containing protein. (562 aa)
	PV10_00833	Uncharacterized protein. (438 aa)
	B0A52_06028	TATA-box-binding protein, variant. (257 aa)
	PV10_01598	TFIIE beta domain-containing protein. (233 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01643	B0A52_01817	A0A0D1Z529	A0A0D1Z4K7	Uncharacterized protein.	RPOL4c domain-containing protein.	0.999
B0A52_01643	B0A52_02609	A0A0D1Z529	A0A0D1XUD0	Uncharacterized protein.	S1 domain-containing protein.	0.999
B0A52_01643	B0A52_06028	A0A0D1Z529	A0A0D2AFF2	Uncharacterized protein.	TATA-box-binding protein, variant.	0.980
B0A52_01643	B0A52_07467	A0A0D1Z529	A0A0D2A8F2	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.988
B0A52_01643	B0A52_09440	A0A0D1Z529	A0A0D1ZJS0	Uncharacterized protein.	Uncharacterized protein.	0.999
B0A52_01643	PV10_00205	A0A0D1Z529	A0A0D2ABM1	Uncharacterized protein.	TAF8_C domain-containing protein.	0.860
B0A52_01643	PV10_00936	A0A0D1Z529	A0A0D1ZTA6	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.655
B0A52_01643	PV10_01121	A0A0D1Z529	A0A0D1X6B2	Uncharacterized protein.	Uncharacterized protein.	0.968
B0A52_01643	PV10_01196	A0A0D1Z529	A0A0D1ZU44	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.981
B0A52_01643	PV10_01598	A0A0D1Z529	A0A0D2AG49	Uncharacterized protein.	TFIIE beta domain-containing protein.	0.976
B0A52_01643	PV10_01859	A0A0D1Z529	A0A0D1YBX6	Uncharacterized protein.	Uncharacterized protein.	0.655
B0A52_01643	PV10_02041	A0A0D1Z529	A0A0D2A5G3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.874
B0A52_01643	PV10_02612	A0A0D1Z529	A0A0D1Y2S5	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.677
B0A52_01643	PV10_03006	A0A0D1Z529	A0A0D1ZL15	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
B0A52_01643	PV10_03106	A0A0D1Z529	A0A0D1ZLG8	Uncharacterized protein.	CFEM domain-containing protein.	0.776
B0A52_01643	PV10_03174	A0A0D1Z529	A0A0D2A9B7	Uncharacterized protein.	HTH araC/xylS-type domain-containing protein.	0.630
B0A52_01643	PV10_03205	A0A0D1Z529	A0A0D1ZNP2	Uncharacterized protein.	Acyl_transf_3 domain-containing protein.	0.855
B0A52_01643	PV10_03471	A0A0D1Z529	A0A0D1ZPI1	Uncharacterized protein.	RNA polymerase II subunit A domain phosphatase ssu72.	0.702
B0A52_01643	PV10_03478	A0A0D1Z529	A0A0D1ZMK2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
B0A52_01643	PV10_03603	A0A0D1Z529	A0A0D1Y5W5	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999