37 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_08458	Uncharacterized protein. (1323 aa)
	PV10_07355	RRM domain-containing protein. (331 aa)
	PV10_05962	RRM domain-containing protein. (332 aa)
	PV10_06697	Nup54 domain-containing protein. (459 aa)
	PV10_04191	RanBD1 domain-containing protein. (263 aa)
	PV10_02022	WD_REPEATS_REGION domain-containing protein. (573 aa)
	PV10_08073	Uncharacterized protein. (156 aa)
	PV10_08406	WD_REPEATS_REGION domain-containing protein. (347 aa)
	PV10_07229	Uncharacterized protein. (1365 aa)
	PV10_03684	RRM domain-containing protein. (173 aa)
	PV10_02459	Uncharacterized protein. (214 aa)
	PV10_00257	C3H1-type domain-containing protein. (715 aa)
	PV10_00608	Nsp1_C domain-containing protein. (694 aa)
	PV10_08034	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (970 aa)
	PV10_08306	Uncharacterized protein. (575 aa)
	PV10_07523	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (571 aa)
	PV10_06980	RanBD1 domain-containing protein. (564 aa)
	PV10_07349	Uncharacterized protein. (1120 aa)
	PV10_05501	PWI domain-containing protein. (464 aa)
	PV10_07821	TAP-C domain-containing protein. (411 aa)
	PV10_07913	Uncharacterized protein. (1486 aa)
	PV10_04199	Uncharacterized protein. (652 aa)
	PV10_06657	Uncharacterized protein. (990 aa)
	PV10_04995	Fip1 domain-containing protein. (345 aa)
	PV10_04472	Uncharacterized protein. (1676 aa)
	PV10_02426	Uncharacterized protein. (757 aa)
	PV10_09190	Nup188_C domain-containing protein. (1825 aa)
	PV10_03215	Uncharacterized protein. (315 aa)
	PV10_08524	Uncharacterized protein. (674 aa)
	PV10_01597	TPR_MLP1_2 domain-containing protein. (2027 aa)
	PV10_01076	Uncharacterized protein. (209 aa)
	PV10_01839	Peptidase S59 domain-containing protein. (1954 aa)
	PV10_06388	Uncharacterized protein. (937 aa)
	PV10_04883	RRM domain-containing protein. (252 aa)
	PV10_01967	Uncharacterized protein. (441 aa)
	B0A52_04130	Nucleoporin GLE2. (362 aa)
	PV10_01566	Slu7 domain-containing protein. (514 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_04130	PV10_00257	A0A0D2A9U4	A0A0D1Y6L8	Nucleoporin GLE2.	C3H1-type domain-containing protein.	0.981
B0A52_04130	PV10_00608	A0A0D2A9U4	A0A0D1Y7P8	Nucleoporin GLE2.	Nsp1_C domain-containing protein.	0.926
B0A52_04130	PV10_01597	A0A0D2A9U4	A0A0D1ZTJ6	Nucleoporin GLE2.	TPR_MLP1_2 domain-containing protein.	0.989
B0A52_04130	PV10_01839	A0A0D2A9U4	A0A0D1ZVX2	Nucleoporin GLE2.	Peptidase S59 domain-containing protein.	0.999
B0A52_04130	PV10_02426	A0A0D2A9U4	A0A0D1ZJ85	Nucleoporin GLE2.	Uncharacterized protein.	0.516
B0A52_04130	PV10_02459	A0A0D2A9U4	A0A0D1Y2B4	Nucleoporin GLE2.	Uncharacterized protein.	0.520
B0A52_04130	PV10_03215	A0A0D2A9U4	A0A0D1ZNP9	Nucleoporin GLE2.	Uncharacterized protein.	0.500
B0A52_04130	PV10_03684	A0A0D2A9U4	A0A0D1XVW6	Nucleoporin GLE2.	RRM domain-containing protein.	0.703
B0A52_04130	PV10_04191	A0A0D2A9U4	A0A0D1WUK2	Nucleoporin GLE2.	RanBD1 domain-containing protein.	0.799
B0A52_04130	PV10_04199	A0A0D2A9U4	A0A0D1ZE13	Nucleoporin GLE2.	Uncharacterized protein.	0.799
B0A52_04130	PV10_04472	A0A0D2A9U4	A0A0D1ZHE8	Nucleoporin GLE2.	Uncharacterized protein.	0.872
B0A52_04130	PV10_04883	A0A0D2A9U4	A0A0D2A3V5	Nucleoporin GLE2.	RRM domain-containing protein.	0.851
B0A52_04130	PV10_05501	A0A0D2A9U4	A0A0D1Z814	Nucleoporin GLE2.	PWI domain-containing protein.	0.706
B0A52_04130	PV10_05962	A0A0D2A9U4	A0A0D1WQP4	Nucleoporin GLE2.	RRM domain-containing protein.	0.814
B0A52_04130	PV10_06697	A0A0D2A9U4	A0A0D1WSS9	Nucleoporin GLE2.	Nup54 domain-containing protein.	0.919
B0A52_04130	PV10_06980	A0A0D2A9U4	A0A0D1Z6S3	Nucleoporin GLE2.	RanBD1 domain-containing protein.	0.794
B0A52_04130	PV10_07229	A0A0D2A9U4	A0A0D1XP20	Nucleoporin GLE2.	Uncharacterized protein.	0.991
B0A52_04130	PV10_07349	A0A0D2A9U4	A0A0D1Z7T3	Nucleoporin GLE2.	Uncharacterized protein.	0.989
B0A52_04130	PV10_07355	A0A0D2A9U4	A0A0D1WM23	Nucleoporin GLE2.	RRM domain-containing protein.	0.821
B0A52_04130	PV10_07821	A0A0D2A9U4	A0A0D1Z935	Nucleoporin GLE2.	TAP-C domain-containing protein.	0.980