(12 nodes) Death Receptor Signaling network (Exophiala mesophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV10_04071	Uncharacterized protein. (182 aa)
	PV10_06422	Uncharacterized protein. (577 aa)
	PV10_03207	Polyubiquitin. (229 aa)
	PV10_08085	AB hydrolase-1 domain-containing protein. (381 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	PV10_05378	Uncharacterized protein. (1232 aa)
	PV10_09013	Uncharacterized protein. (197 aa)
	PV10_01130	Uncharacterized protein. (176 aa)
	PV10_01164	Uncharacterized protein. (192 aa)
	PV10_03754	Uncharacterized protein. (549 aa)
	B0A52_04813	Guanine nucleotide-binding protein subunit beta-like protein. (316 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00659	B0A52_04813	A0A0D1ZQI9	A0A0D2A1U3	Ubiquitin-40S ribosomal protein S27a.	Guanine nucleotide-binding protein subunit beta-like protein.	0.977
B0A52_00659	PV10_03207	A0A0D1ZQI9	A0A0D1Y4J0	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.969
B0A52_00659	PV10_03754	A0A0D1ZQI9	A0A0D2A090	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.943
B0A52_00659	PV10_06422	A0A0D1ZQI9	A0A0D1XUP7	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.603
B0A52_00659	PV10_09013	A0A0D1ZQI9	A0A0D1ZMU7	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.712
B0A52_04813	B0A52_00659	A0A0D2A1U3	A0A0D1ZQI9	Guanine nucleotide-binding protein subunit beta-like protein.	Ubiquitin-40S ribosomal protein S27a.	0.977
B0A52_04813	PV10_03207	A0A0D2A1U3	A0A0D1Y4J0	Guanine nucleotide-binding protein subunit beta-like protein.	Polyubiquitin.	0.850
B0A52_04813	PV10_03754	A0A0D2A1U3	A0A0D2A090	Guanine nucleotide-binding protein subunit beta-like protein.	Uncharacterized protein.	0.597
B0A52_04813	PV10_08689	A0A0D2A1U3	A0A0D1Z5B3	Guanine nucleotide-binding protein subunit beta-like protein.	BZIP domain-containing protein.	0.977
PV10_03207	B0A52_00659	A0A0D1Y4J0	A0A0D1ZQI9	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.969
PV10_03207	B0A52_04813	A0A0D1Y4J0	A0A0D2A1U3	Polyubiquitin.	Guanine nucleotide-binding protein subunit beta-like protein.	0.850
PV10_03207	PV10_03754	A0A0D1Y4J0	A0A0D2A090	Polyubiquitin.	Uncharacterized protein.	0.980
PV10_03207	PV10_08689	A0A0D1Y4J0	A0A0D1Z5B3	Polyubiquitin.	BZIP domain-containing protein.	0.959
PV10_03207	PV10_09013	A0A0D1Y4J0	A0A0D1ZMU7	Polyubiquitin.	Uncharacterized protein.	0.732
PV10_03754	B0A52_00659	A0A0D2A090	A0A0D1ZQI9	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.943
PV10_03754	B0A52_04813	A0A0D2A090	A0A0D2A1U3	Uncharacterized protein.	Guanine nucleotide-binding protein subunit beta-like protein.	0.597
PV10_03754	PV10_03207	A0A0D2A090	A0A0D1Y4J0	Uncharacterized protein.	Polyubiquitin.	0.980
PV10_03754	PV10_08689	A0A0D2A090	A0A0D1Z5B3	Uncharacterized protein.	BZIP domain-containing protein.	0.943
PV10_05378	PV10_09013	A0A0D1Z9Q7	A0A0D1ZMU7	Uncharacterized protein.	Uncharacterized protein.	0.812
PV10_06422	B0A52_00659	A0A0D1XUP7	A0A0D1ZQI9	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.603