105 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_05303	S5A_REDUCTASE domain-containing protein. (264 aa)
	PV10_05418	SE domain-containing protein. (491 aa)
	PV10_06309	Aldo_ket_red domain-containing protein. (288 aa)
	PV10_06603	Uncharacterized protein. (388 aa)
	PV10_06645	Uncharacterized protein. (304 aa)
	PV10_06689	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (740 aa)
	PV10_04115	Uncharacterized protein; Belongs to the cytochrome P450 family. (590 aa)
	PV10_04614	Isopentenyl-diphosphate delta-isomerase. (288 aa)
	PV10_04891	Uncharacterized protein; Belongs to the cytochrome P450 family. (520 aa)
	PV10_02358	ANK_REP_REGION domain-containing protein. (159 aa)
	PV10_02396	Farnesyl-diphosphate farnesyltransferase. (489 aa)
	PV10_02847	Uncharacterized protein. (398 aa)
	PV10_03406	Aldo_ket_red domain-containing protein. (322 aa)
	PV10_03571	Uncharacterized protein. (976 aa)
	PV10_00298	Uncharacterized protein. (460 aa)
	PV10_01198	Uncharacterized protein. (382 aa)
	PV10_01308	Epimerase domain-containing protein. (397 aa)
	PV10_01908	BHLH domain-containing protein. (884 aa)
	PV10_08972	Peptidase_S8 domain-containing protein. (972 aa)
	PV10_09029	Uncharacterized protein. (485 aa)
	PV10_09088	S5A_REDUCTASE domain-containing protein. (316 aa)
	PV10_09154	Uncharacterized protein; Belongs to the cytochrome P450 family. (540 aa)
	PV10_07974	Zn(2)-C6 fungal-type domain-containing protein. (748 aa)
	PV10_08734	Uncharacterized protein. (598 aa)
	PV10_08205	Uncharacterized protein. (233 aa)
	PV10_07077	Peroxisomal hydratase-dehydrogenase-epimerase. (901 aa)
	PV10_07160	Uncharacterized protein. (321 aa)
	PV10_07257	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (297 aa)
	PV10_08647	Uncharacterized protein. (574 aa)
	PV10_08653	BHLH domain-containing protein. (456 aa)
	PV10_07416	Uncharacterized protein. (815 aa)
	PV10_05519	CBFD_NFYB_HMF domain-containing protein. (292 aa)
	PV10_07626	Uncharacterized protein. (1262 aa)
	PV10_06176	Uncharacterized protein. (1363 aa)
	PV10_06363	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (273 aa)
	PV10_06506	3Beta_HSD domain-containing protein. (429 aa)
	PV10_06642	Uncharacterized protein. (212 aa)
	PV10_06729	Uncharacterized protein; Belongs to the cytochrome P450 family. (523 aa)
	PV10_06781	Uncharacterized protein. (587 aa)
	PV10_03898	Uncharacterized protein. (613 aa)
	PV10_04728	Aldo_ket_red domain-containing protein. (340 aa)
	PV10_04128	acidPPc domain-containing protein. (234 aa)
	PV10_04259	Fungal_trans domain-containing protein. (654 aa)
	PV10_01929	Uncharacterized protein. (417 aa)
	PV10_00697	Uncharacterized protein. (249 aa)
	PV10_01368	EXPERA domain-containing protein. (262 aa)
	PV10_07459	Uncharacterized protein. (491 aa)
	PV10_05189	Uncharacterized protein; Belongs to the cytochrome P450 family. (549 aa)
	PV10_01976	Acyl-CoA thioesterase II. (261 aa)
	PV10_05187	Uncharacterized protein. (544 aa)
	PV10_05201	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (278 aa)
	PV10_02651	Uncharacterized protein. (403 aa)
	PV10_02085	Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (502 aa)
	PV10_02701	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (283 aa)
	PV10_02815	Acyl-CoA thioesterase II. (337 aa)
	PV10_03559	Uncharacterized protein; Belongs to the OSBP family. (1240 aa)
	PV10_00064	FAD-binding PCMH-type domain-containing protein. (533 aa)
	PV10_08263	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)
	PV10_03476	Acyl-CoA thioesterase II. (377 aa)
	PV10_03641	Aldo_ket_red domain-containing protein. (358 aa)
	PV10_07420	EXPERA domain-containing protein. (260 aa)
	PV10_07253	CBFD_NFYB_HMF domain-containing protein. (155 aa)
	PV10_07014	Aldo_ket_red domain-containing protein. (310 aa)
	PV10_01119	Uncharacterized protein; Belongs to the OSBP family. (559 aa)
	PV10_01064	Uncharacterized protein; Belongs to the cytochrome P450 family. (276 aa)
	PV10_00451	PH domain-containing protein. (977 aa)
	PV10_00339	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (370 aa)
	PV10_00589	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (460 aa)
	B0A52_06643	SCP2 domain-containing protein. (129 aa)
	PV10_03015	Uncharacterized protein. (394 aa)
	PV10_02887	NAD(P)-bd_dom domain-containing protein. (309 aa)
	PV10_02877	Uncharacterized protein. (877 aa)
	PV10_02323	Uncharacterized protein; Belongs to the cytochrome P450 family. (538 aa)
	PV10_02155	Uncharacterized protein. (407 aa)
	PV10_05163	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (463 aa)
	PV10_05000	Uncharacterized protein. (245 aa)
	PV10_04805	Acyl-CoA thioesterase II. (397 aa)
	PV10_05922	Aldo_ket_red domain-containing protein. (283 aa)
	PV10_05833	Aldo_ket_red domain-containing protein. (305 aa)
	PV10_09201	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (389 aa)
	PV10_09104	Uncharacterized protein. (585 aa)
	PV10_08404	Aldo_ket_red domain-containing protein. (342 aa)
	PV10_08530	Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. (397 aa)
	PV10_08709	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (457 aa)
	PV10_08920	Uncharacterized protein. (259 aa)
	PV10_06826	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids. (336 aa)
	PV10_07081	Uncharacterized protein. (613 aa)
	PV10_05598	Uncharacterized protein. (267 aa)
	PV10_05615	Uncharacterized protein. (1327 aa)
	PV10_05650	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (357 aa)
	PV10_06412	Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (347 aa)
	PV10_03904	Uncharacterized protein. (297 aa)
	PV10_05143	HTH APSES-type domain-containing protein. (406 aa)
	PV10_05217	MaoC-like domain-containing protein. (353 aa)
	PV10_02082	Uncharacterized protein. (313 aa)
	PV10_02305	Uncharacterized protein. (348 aa)
	PV10_03562	3-hydroxy-3-methylglutaryl coenzyme A reductase. (1150 aa)
	PV10_00478	Uncharacterized protein. (253 aa)
	PV10_00738	Uncharacterized protein. (233 aa)
	PV10_00834	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (408 aa)
	PV10_01765	Uncharacterized protein. (446 aa)
	PV10_08590	Aldo_ket_red domain-containing protein. (339 aa)
	PV10_08660	Uncharacterized protein. (480 aa)
	PV10_07578	Uncharacterized protein. (523 aa)
	PV10_07716	Uncharacterized protein. (307 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_06643	PV10_00298	A0A0D2AAY2	A0A0D1Y6R7	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_00339	A0A0D2AAY2	A0A0D1ZR94	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.402
B0A52_06643	PV10_00589	A0A0D2AAY2	A0A0D2ACU1	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.817
B0A52_06643	PV10_00697	A0A0D2AAY2	A0A0D2AD93	SCP2 domain-containing protein.	Uncharacterized protein.	0.677
B0A52_06643	PV10_00738	A0A0D2AAY2	A0A0D1X548	SCP2 domain-containing protein.	Uncharacterized protein.	0.677
B0A52_06643	PV10_01198	A0A0D2AAY2	A0A0D1YA00	SCP2 domain-containing protein.	Uncharacterized protein.	0.402
B0A52_06643	PV10_01929	A0A0D2AAY2	A0A0D1ZUQ2	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_02155	A0A0D2AAY2	A0A0D2A5X4	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_02701	A0A0D2AAY2	A0A0D1ZK86	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.402
B0A52_06643	PV10_02847	A0A0D2AAY2	A0A0D1Y3G8	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_02887	A0A0D2AAY2	A0A0D2A895	SCP2 domain-containing protein.	NAD(P)-bd_dom domain-containing protein.	0.677
B0A52_06643	PV10_03562	A0A0D2AAY2	A0A0D1X2I7	SCP2 domain-containing protein.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.449
B0A52_06643	PV10_05000	A0A0D2AAY2	A0A0D2A496	SCP2 domain-containing protein.	Uncharacterized protein.	0.677
B0A52_06643	PV10_05143	A0A0D2AAY2	A0A0D1WX65	SCP2 domain-containing protein.	HTH APSES-type domain-containing protein.	0.402
B0A52_06643	PV10_05163	A0A0D2AAY2	A0A0D2A4W3	SCP2 domain-containing protein.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.816
B0A52_06643	PV10_05201	A0A0D2AAY2	A0A0D1ZJF7	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.402
B0A52_06643	PV10_05217	A0A0D2AAY2	A0A0D1WXF0	SCP2 domain-containing protein.	MaoC-like domain-containing protein.	0.634
B0A52_06643	PV10_06363	A0A0D2AAY2	A0A0D1ZB11	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.402
B0A52_06643	PV10_06603	A0A0D2AAY2	A0A0D1XV59	SCP2 domain-containing protein.	Uncharacterized protein.	0.634
B0A52_06643	PV10_06826	A0A0D2AAY2	A0A0D1WKF3	SCP2 domain-containing protein.	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.	0.677