14 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_01031	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (771 aa)
	PV10_02252	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (782 aa)
	PV10_00065	Uncharacterized protein. (1478 aa)
	PV10_04357	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family. (983 aa)
	PV10_06468	Uncharacterized protein. (258 aa)
	PV10_00893	RING-CH-type domain-containing protein. (398 aa)
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV10_08131	Uncharacterized protein. (570 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	PV10_08024	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (605 aa)
	PV10_03207	Polyubiquitin. (229 aa)
	PV10_04226	RING-CH-type domain-containing protein. (1563 aa)
	PV10_07372	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (1070 aa)
	PV10_00153	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (914 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00659	PV10_03207	A0A0D1ZQI9	A0A0D1Y4J0	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.969
PV10_00065	PV10_01031	A0A0D2AB53	A0A0D2AEC4	Uncharacterized protein.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.590
PV10_00065	PV10_04357	A0A0D2AB53	A0A0D2A247	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.	0.590
PV10_00065	PV10_06468	A0A0D2AB53	A0A0D1ZYR3	Uncharacterized protein.	Uncharacterized protein.	0.569
PV10_00065	PV10_07372	A0A0D2AB53	A0A0D1XPL9	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.589
PV10_00065	PV10_08131	A0A0D2AB53	A0A0D1ZNV5	Uncharacterized protein.	Uncharacterized protein.	0.700
PV10_00153	PV10_01031	A0A0D1X386	A0A0D2AEC4	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.576
PV10_00153	PV10_04357	A0A0D1X386	A0A0D2A247	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.	0.576
PV10_00153	PV10_06468	A0A0D1X386	A0A0D1ZYR3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein.	0.431
PV10_00153	PV10_08024	A0A0D1X386	A0A0D1Z0I1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.774
PV10_00893	PV10_03207	A0A0D1ZR75	A0A0D1Y4J0	RING-CH-type domain-containing protein.	Polyubiquitin.	0.438
PV10_01031	PV10_00065	A0A0D2AEC4	A0A0D2AB53	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.590
PV10_01031	PV10_00153	A0A0D2AEC4	A0A0D1X386	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.576
PV10_01031	PV10_02252	A0A0D2AEC4	A0A0D2A6B5	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.759
PV10_01031	PV10_08024	A0A0D2AEC4	A0A0D1Z0I1	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.576
PV10_01031	PV10_08131	A0A0D2AEC4	A0A0D1ZNV5	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.810
PV10_02252	PV10_01031	A0A0D2A6B5	A0A0D2AEC4	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.759
PV10_02252	PV10_04357	A0A0D2A6B5	A0A0D2A247	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.	0.815
PV10_02252	PV10_06468	A0A0D2A6B5	A0A0D1ZYR3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein.	0.431
PV10_02252	PV10_08024	A0A0D2A6B5	A0A0D1Z0I1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.784