STRINGSTRING
PV10_03478 PV10_03478 B0A52_06028 B0A52_06028 PV10_02591 PV10_02591 PV10_08910 PV10_08910 PV10_05522 PV10_05522 PV10_03752 PV10_03752 B0A52_06664 B0A52_06664 PV10_01121 PV10_01121 PV10_05585 PV10_05585 B0A52_02609 B0A52_02609 PV10_04600 PV10_04600 PV10_02612 PV10_02612 PV10_03176 PV10_03176 PV10_03603 PV10_03603 B0A52_01817 B0A52_01817 PV10_08543 PV10_08543 B0A52_01643 B0A52_01643 PV10_07636 PV10_07636 PV10_05992 PV10_05992 PV10_06724 PV10_06724 PV10_06302 PV10_06302 PV10_03751 PV10_03751 PV10_04961 PV10_04961 B0A52_09440 B0A52_09440 PV10_03006 PV10_03006 B0A52_00854 B0A52_00854 PV10_00936 PV10_00936 PV10_01196 PV10_01196 PV10_05648 PV10_05648 PV10_05533 PV10_05533 PV10_01689 PV10_01689 PV10_07679 PV10_07679
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_03478DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1761 aa)
B0A52_06028TATA-box-binding protein, variant. (257 aa)
PV10_02591Methyltranfer_dom domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (357 aa)
PV10_08910Uncharacterized protein. (790 aa)
PV10_05522Serine/threonine-protein kinase bur1. (690 aa)
PV10_03752Uncharacterized protein. (350 aa)
B0A52_06664Histone acetyltransferase GCN5. (404 aa)
PV10_01121Uncharacterized protein. (373 aa)
PV10_05585GATA-type domain-containing protein. (972 aa)
B0A52_02609S1 domain-containing protein. (169 aa)
PV10_04600Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (560 aa)
PV10_02612Uncharacterized protein; Belongs to the cyclin family. (517 aa)
PV10_03176Uncharacterized protein. (1041 aa)
PV10_03603DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1262 aa)
B0A52_01817RPOL4c domain-containing protein. (152 aa)
PV10_08543Uncharacterized protein. (386 aa)
B0A52_01643Uncharacterized protein. (152 aa)
PV10_07636BTB domain-containing protein. (957 aa)
PV10_05992Uncharacterized protein. (407 aa)
PV10_06724DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
PV10_06302Uncharacterized protein. (556 aa)
PV10_03751Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
PV10_04961RPOLD domain-containing protein. (337 aa)
B0A52_09440Uncharacterized protein. (238 aa)
PV10_03006RNA_pol_L_2 domain-containing protein. (122 aa)
B0A52_00854Histone H2B; Belongs to the histone H2B family. (140 aa)
PV10_00936Uncharacterized protein; Belongs to the cyclin family. (424 aa)
PV10_01196Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (705 aa)
PV10_05648Uncharacterized protein. (393 aa)
PV10_05533Fork-head domain-containing protein. (738 aa)
PV10_01689Nitrogen regulatory protein DAL80. (258 aa)
PV10_07679ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (468 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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