11 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_01558	Uncharacterized protein. (937 aa)
	PV10_03754	Uncharacterized protein. (549 aa)
	PV10_05913	TYR_PHOSPHATASE_2 domain-containing protein. (414 aa)
	PV10_08911	Uncharacterized protein. (719 aa)
	B0A52_07266	RING-box protein 1. (124 aa)
	PV10_03207	Polyubiquitin. (229 aa)
	PV10_08298	Uncharacterized protein. (320 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	PV10_05313	Uncharacterized protein. (268 aa)
	PV10_06100	MFS domain-containing protein. (514 aa)
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00659	B0A52_07266	A0A0D1ZQI9	A0A0D1XSV6	Ubiquitin-40S ribosomal protein S27a.	RING-box protein 1.	0.912
B0A52_00659	PV10_01558	A0A0D1ZQI9	A0A0D1ZV47	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.725
B0A52_00659	PV10_03207	A0A0D1ZQI9	A0A0D1Y4J0	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.969
B0A52_00659	PV10_03754	A0A0D1ZQI9	A0A0D2A090	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.943
B0A52_00659	PV10_08911	A0A0D1ZQI9	A0A0D1XMG6	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.725
B0A52_07266	B0A52_00659	A0A0D1XSV6	A0A0D1ZQI9	RING-box protein 1.	Ubiquitin-40S ribosomal protein S27a.	0.912
B0A52_07266	PV10_01558	A0A0D1XSV6	A0A0D1ZV47	RING-box protein 1.	Uncharacterized protein.	0.945
B0A52_07266	PV10_03207	A0A0D1XSV6	A0A0D1Y4J0	RING-box protein 1.	Polyubiquitin.	0.936
B0A52_07266	PV10_08689	A0A0D1XSV6	A0A0D1Z5B3	RING-box protein 1.	BZIP domain-containing protein.	0.912
B0A52_07266	PV10_08911	A0A0D1XSV6	A0A0D1XMG6	RING-box protein 1.	Uncharacterized protein.	0.945
PV10_01558	B0A52_00659	A0A0D1ZV47	A0A0D1ZQI9	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.725
PV10_01558	B0A52_07266	A0A0D1ZV47	A0A0D1XSV6	Uncharacterized protein.	RING-box protein 1.	0.945
PV10_01558	PV10_03207	A0A0D1ZV47	A0A0D1Y4J0	Uncharacterized protein.	Polyubiquitin.	0.816
PV10_01558	PV10_08689	A0A0D1ZV47	A0A0D1Z5B3	Uncharacterized protein.	BZIP domain-containing protein.	0.725
PV10_03207	B0A52_00659	A0A0D1Y4J0	A0A0D1ZQI9	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.969
PV10_03207	B0A52_07266	A0A0D1Y4J0	A0A0D1XSV6	Polyubiquitin.	RING-box protein 1.	0.936
PV10_03207	PV10_01558	A0A0D1Y4J0	A0A0D1ZV47	Polyubiquitin.	Uncharacterized protein.	0.816
PV10_03207	PV10_03754	A0A0D1Y4J0	A0A0D2A090	Polyubiquitin.	Uncharacterized protein.	0.980
PV10_03207	PV10_08689	A0A0D1Y4J0	A0A0D1Z5B3	Polyubiquitin.	BZIP domain-containing protein.	0.959
PV10_03207	PV10_08911	A0A0D1Y4J0	A0A0D1XMG6	Polyubiquitin.	Uncharacterized protein.	0.816