48 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_03446	CutC domain-containing protein. (226 aa)
	PV10_01787	GYF domain-containing protein. (1507 aa)
	PV10_02139	Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1078 aa)
	PV10_04526	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1573 aa)
	PV10_03831	Copper-translocating P-type ATPase. (1195 aa)
	PV10_06124	Uncharacterized protein. (494 aa)
	PV10_06120	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1548 aa)
	MED19	Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (416 aa)
	PV10_08448	Uncharacterized protein. (461 aa)
	PV10_08202	Uncharacterized protein. (777 aa)
	PV10_08033	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1433 aa)
	PV10_01737	Ion_trans domain-containing protein. (631 aa)
	PV10_08338	Uncharacterized protein. (308 aa)
	PV10_06213	Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1069 aa)
	PV10_08368	Cation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1140 aa)
	PV10_05657	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1223 aa)
	PV10_06561	Uncharacterized protein. (923 aa)
	PV10_04236	Calcium-translocating P-type ATPase, PMCA-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1041 aa)
	PV10_03937	Copper-translocating P-type ATPase. (1171 aa)
	PV10_05284	Uncharacterized protein. (1179 aa)
	PV10_05038	Uncharacterized protein. (1262 aa)
	PV10_05211	Amidohydro-rel domain-containing protein. (357 aa)
	PV10_05277	Uncharacterized protein. (1186 aa)
	PV10_02061	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1025 aa)
	PV10_02536	PHB domain-containing protein. (356 aa)
	PV10_03639	Uncharacterized protein. (1196 aa)
	PV10_03210	Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1119 aa)
	B0A52_00659	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV10_00782	Uncharacterized protein. (1219 aa)
	PV10_08890	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1261 aa)
	PV10_01734	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1321 aa)
	PV10_05525	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1347 aa)
	PV10_05813	HMA domain-containing protein. (935 aa)
	PV10_06593	Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1065 aa)
	PV10_03832	Uncharacterized protein. (1105 aa)
	PV10_04112	CYTH domain-containing protein. (225 aa)
	PV10_04709	Chloride channel protein. (892 aa)
	PV10_02814	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1357 aa)
	PV10_08661	Ion_trans domain-containing protein. (231 aa)
	PV10_07966	Uncharacterized protein. (1002 aa)
	PV10_08110	DUF676 domain-containing protein. (663 aa)
	PV10_08348	Uncharacterized protein. (585 aa)
	PV10_08400	SPX domain-containing protein. (838 aa)
	PV10_08689	BZIP domain-containing protein. (291 aa)
	PV10_07195	Chloride channel protein. (877 aa)
	PV10_07263	Uncharacterized protein. (736 aa)
	PV10_05524	Uncharacterized protein. (341 aa)
	PV10_07875	SPX domain-containing protein. (804 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_00659	PV10_05038	A0A0D1ZQI9	A0A0D1ZIU4	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.630
B0A52_00659	PV10_07966	A0A0D1ZQI9	A0A0D1Z2W6	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.626
MED19	PV10_07966	A0A0D1XTB6	A0A0D1Z2W6	Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Uncharacterized protein.	0.426
PV10_00782	PV10_01734	A0A0D1ZQX2	A0A0D1ZU41	Uncharacterized protein.	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.	0.438
PV10_00782	PV10_02061	A0A0D1ZQX2	A0A0D1ZK17	Uncharacterized protein.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.438
PV10_00782	PV10_02139	A0A0D1ZQX2	A0A0D1Y1E0	Uncharacterized protein.	Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.438
PV10_00782	PV10_02814	A0A0D1ZQX2	A0A0D2A838	Uncharacterized protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.438
PV10_00782	PV10_03210	A0A0D1ZQX2	A0A0D1ZNP5	Uncharacterized protein.	Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.438
PV10_00782	PV10_04112	A0A0D1ZQX2	A0A0D2A1B6	Uncharacterized protein.	CYTH domain-containing protein.	0.438
PV10_00782	PV10_04236	A0A0D1ZQX2	A0A0D1ZE73	Uncharacterized protein.	Calcium-translocating P-type ATPase, PMCA-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.438
PV10_00782	PV10_04526	A0A0D1ZQX2	A0A0D1XYG3	Uncharacterized protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.438
PV10_00782	PV10_05524	A0A0D1ZQX2	A0A0D1Z854	Uncharacterized protein.	Uncharacterized protein.	0.441
PV10_00782	PV10_05525	A0A0D1ZQX2	A0A0D1ZVU5	Uncharacterized protein.	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.	0.441
PV10_00782	PV10_06120	A0A0D1ZQX2	A0A0D1XTV7	Uncharacterized protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.438
PV10_00782	PV10_06124	A0A0D1ZQX2	A0A0D1XTW0	Uncharacterized protein.	Uncharacterized protein.	0.438
PV10_00782	PV10_06213	A0A0D1ZQX2	A0A0D1WRE4	Uncharacterized protein.	Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.438
PV10_00782	PV10_06593	A0A0D1ZQX2	A0A0D1ZZ62	Uncharacterized protein.	Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.438
PV10_00782	PV10_08033	A0A0D1ZQX2	A0A0D1XJG9	Uncharacterized protein.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.438
PV10_00782	PV10_08348	A0A0D1ZQX2	A0A0D1Z442	Uncharacterized protein.	Uncharacterized protein.	0.438
PV10_00782	PV10_08368	A0A0D1ZQX2	A0A0D1WIN1	Uncharacterized protein.	Cation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.438