65 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_05770	WD_REPEATS_REGION domain-containing protein. (1588 aa)
	PV10_07896	Uncharacterized protein. (257 aa)
	PV10_08748	RING-type domain-containing protein. (445 aa)
	PV10_08000	Uncharacterized protein. (726 aa)
	PV10_08986	RING-type domain-containing protein. (908 aa)
	PV10_01631	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1258 aa)
	PV10_00822	Uncharacterized protein. (1249 aa)
	PV10_00405	RING-type domain-containing protein. (534 aa)
	PV10_00111	RBR-type E3 ubiquitin transferase. (986 aa)
	PV10_03651	Uncharacterized protein. (593 aa)
	PV10_02119	Uncharacterized protein. (1418 aa)
	PV10_04910	Uncharacterized protein. (979 aa)
	PV10_04550	RING-type domain-containing protein. (781 aa)
	PV10_04496	DNA repair protein rad18. (538 aa)
	PV10_06782	RING-type domain-containing protein. (702 aa)
	PV10_07332	RING-type domain-containing protein. (272 aa)
	PV10_07196	Uncharacterized protein. (1157 aa)
	PV10_07032	Uncharacterized protein. (422 aa)
	PV10_00746	Pex2_Pex12 domain-containing protein. (448 aa)
	PV10_00486	RING-type domain-containing protein. (431 aa)
	PV10_00148	RBR-type E3 ubiquitin transferase. (514 aa)
	PV10_04448	Uncharacterized protein. (1153 aa)
	PV10_04127	RBR-type E3 ubiquitin transferase. (734 aa)
	PV10_03754	Uncharacterized protein. (549 aa)
	PV10_06624	Uncharacterized protein. (1498 aa)
	PV10_06984	RING-type domain-containing protein. (832 aa)
	PV10_01054	RING-type domain-containing protein. (291 aa)
	PV10_08842	E3 ubiquitin protein ligase. (724 aa)
	PV10_00691	Uncharacterized protein. (412 aa)
	PV10_08151	Uncharacterized protein. (1420 aa)
	PV10_03263	RBR-type E3 ubiquitin transferase. (686 aa)
	PV10_03113	RING-type domain-containing protein. (422 aa)
	PV10_03586	Uncharacterized protein. (645 aa)
	PV10_09217	RING-type domain-containing protein. (518 aa)
	PV10_02712	RING-type domain-containing protein. (1589 aa)
	PV10_03247	Vps8 domain-containing protein. (1539 aa)
	PV10_03208	Uncharacterized protein. (858 aa)
	PV10_03072	RING-type domain-containing protein. (404 aa)
	PV10_02806	RING-type domain-containing protein. (204 aa)
	PV10_02696	Uncharacterized protein. (348 aa)
	PV10_02098	RING-type domain-containing protein. (269 aa)
	PV10_05287	Uncharacterized protein. (584 aa)
	PV10_04996	RING-type domain-containing protein. (449 aa)
	PV10_04837	Pex2_Pex12 domain-containing protein. (469 aa)
	PV10_02121	R3H domain-containing protein. (1101 aa)
	PV10_04515	Uncharacterized protein. (446 aa)
	PV10_05052	E3 ubiquitin-protein ligase PEP5. (976 aa)
	PV10_03810	Uncharacterized protein. (1152 aa)
	PV10_04535	Uncharacterized protein. (615 aa)
	PV10_04452	RING-type domain-containing protein. (476 aa)
	PV10_06440	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2153 aa)
	PV10_05726	Pep3_Vps18 domain-containing protein. (963 aa)
	PV10_06181	RING-type domain-containing protein. (398 aa)
	PV10_06158	Uncharacterized protein. (964 aa)
	PV10_06076	Uncharacterized protein. (324 aa)
	PV10_07321	Uncharacterized protein. (544 aa)
	PV10_07902	Uncharacterized protein. (993 aa)
	PV10_08750	Uncharacterized protein. (1745 aa)
	PV10_07150	RING-type domain-containing protein. (887 aa)
	PV10_00519	Uncharacterized protein. (468 aa)
	PV10_02986	Uncharacterized protein. (988 aa)
	PV10_02367	RING-type domain-containing protein. (463 aa)
	PV10_02311	RING-type domain-containing protein. (813 aa)
	PV10_02149	RING-type domain-containing protein. (521 aa)
	B0A52_07266	RING-box protein 1. (124 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_07266	PV10_00148	A0A0D1XSV6	A0A0D2ABF5	RING-box protein 1.	RBR-type E3 ubiquitin transferase.	0.930
B0A52_07266	PV10_00519	A0A0D1XSV6	A0A0D1Y7I3	RING-box protein 1.	Uncharacterized protein.	0.573
B0A52_07266	PV10_00822	A0A0D1XSV6	A0A0D1X5J0	RING-box protein 1.	Uncharacterized protein.	0.566
B0A52_07266	PV10_01054	A0A0D1XSV6	A0A0D1ZRQ5	RING-box protein 1.	RING-type domain-containing protein.	0.573
B0A52_07266	PV10_02098	A0A0D1XSV6	A0A0D1ZK71	RING-box protein 1.	RING-type domain-containing protein.	0.773
B0A52_07266	PV10_02119	A0A0D1XSV6	A0A0D1WXZ4	RING-box protein 1.	Uncharacterized protein.	0.566
B0A52_07266	PV10_02806	A0A0D1XSV6	A0A0D1ZKH8	RING-box protein 1.	RING-type domain-containing protein.	0.416
B0A52_07266	PV10_03810	A0A0D1XSV6	A0A0D1ZFB0	RING-box protein 1.	Uncharacterized protein.	0.566
B0A52_07266	PV10_04448	A0A0D1XSV6	A0A0D2A2B7	RING-box protein 1.	Uncharacterized protein.	0.566
B0A52_07266	PV10_04496	A0A0D1XSV6	A0A0D1WVA1	RING-box protein 1.	DNA repair protein rad18.	0.768
B0A52_07266	PV10_04837	A0A0D1XSV6	A0A0D1ZIC4	RING-box protein 1.	Pex2_Pex12 domain-containing protein.	0.407
B0A52_07266	PV10_06158	A0A0D1XSV6	A0A0D1ZAD5	RING-box protein 1.	Uncharacterized protein.	0.566
B0A52_07266	PV10_07196	A0A0D1XSV6	A0A0D1WLF4	RING-box protein 1.	Uncharacterized protein.	0.773
B0A52_07266	PV10_07321	A0A0D1XSV6	A0A0D1Z7Q2	RING-box protein 1.	Uncharacterized protein.	0.573
B0A52_07266	PV10_07896	A0A0D1XSV6	A0A0D1XRA0	RING-box protein 1.	Uncharacterized protein.	0.426
B0A52_07266	PV10_08748	A0A0D1XSV6	A0A0D1XLV5	RING-box protein 1.	RING-type domain-containing protein.	0.416
PV10_00111	PV10_00148	A0A0D1X360	A0A0D2ABF5	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.697
PV10_00111	PV10_03754	A0A0D1X360	A0A0D2A090	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.571
PV10_00148	B0A52_07266	A0A0D2ABF5	A0A0D1XSV6	RBR-type E3 ubiquitin transferase.	RING-box protein 1.	0.930
PV10_00148	PV10_00111	A0A0D2ABF5	A0A0D1X360	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.697