STRINGSTRING
PV10_01511 PV10_01511 PV10_05529 PV10_05529 PV10_05757 PV10_05757 NAT10 NAT10 PV10_06435 PV10_06435 PV10_02999 PV10_02999 PV10_02579 PV10_02579 PV10_01953 PV10_01953 PV10_04525 PV10_04525 PV10_04469 PV10_04469 B0A52_05893 B0A52_05893 PV10_06499 PV10_06499 PV10_06298 PV10_06298 PV10_06062 PV10_06062 PV10_05901 PV10_05901 PV10_05517 PV10_05517 PV10_07480 PV10_07480 PV10_07365 PV10_07365 PV10_08488 PV10_08488 PV10_04622 PV10_04622 PV10_02365 PV10_02365 PV10_03999 PV10_03999 PV10_04982 PV10_04982 PV10_02892 PV10_02892 PV10_00501 PV10_00501 PV10_01163 PV10_01163 PV10_01310 PV10_01310 PV10_01510 PV10_01510 PV10_01668 PV10_01668 B0A52_01222 B0A52_01222 PV10_03378 PV10_03378 PV10_03347 PV10_03347 PV10_01314 PV10_01314 PV10_07168 PV10_07168 PV10_07133 PV10_07133 PV10_08688 PV10_08688 PV10_08657 PV10_08657 PV10_00184 PV10_00184 PV10_09194 PV10_09194 PV10_03474 PV10_03474 PV10_00469 PV10_00469 PV10_00870 PV10_00870 PV10_01786 PV10_01786 PV10_09001 PV10_09001 PV10_09023 PV10_09023 PV10_07963 PV10_07963 PV10_08401 PV10_08401 PV10_08444 PV10_08444 PV10_08540 PV10_08540 PV10_07082 PV10_07082 PV10_07495 PV10_07495 PV10_05821 PV10_05821 PV10_06511 PV10_06511 PV10_06598 PV10_06598 PV10_03701 PV10_03701 PV10_04384 PV10_04384 PV10_04767 PV10_04767 PV10_05266 PV10_05266 PV10_02838 PV10_02838 PV10_02871 PV10_02871 B0A52_07527 B0A52_07527 B0A52_09227 B0A52_09227 PV10_03656 PV10_03656 PV10_01518 PV10_01518 PV10_01591 PV10_01591 PV10_08169 PV10_08169 PV10_08407 PV10_08407 PV10_07946 PV10_07946 PV10_08687 PV10_08687 PV10_08711 PV10_08711 PV10_08181 PV10_08181 B0A52_01786 B0A52_01786 PV10_07197 PV10_07197 PV10_07749 PV10_07749 TIF6 TIF6 PV10_07293 PV10_07293 PV10_07470 PV10_07470 PV10_05496 PV10_05496 PV10_07821 PV10_07821 PV10_05521 PV10_05521 PV10_05602 PV10_05602 PV10_06744 PV10_06744 PV10_04245 PV10_04245 PV10_03778 PV10_03778 PV10_04635 PV10_04635 PV10_04922 PV10_04922 PV10_04173 PV10_04173 PV10_05257 PV10_05257 B0A52_08726 B0A52_08726 PV10_01373 PV10_01373
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_01511Uncharacterized protein. (982 aa)
PV10_05529Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (191 aa)
PV10_05757CP-type G domain-containing protein. (674 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1101 aa)
PV10_06435C2H2-type domain-containing protein. (575 aa)
PV10_02999Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (580 aa)
PV10_02579Exonuclease domain-containing protein. (339 aa)
PV10_01953Uncharacterized protein. (1004 aa)
PV10_04525Tr-type G domain-containing protein. (1104 aa)
PV10_04469DUF4604 domain-containing protein. (184 aa)
B0A52_05893H/ACA ribonucleoprotein complex subunit 3. (63 aa)
PV10_06499Uncharacterized protein. (237 aa)
PV10_06298Ribosomal RNA small subunit methyltransferase NEP1. (258 aa)
PV10_06062RAI1 domain-containing protein. (294 aa)
PV10_05901Uncharacterized protein. (1056 aa)
PV10_05517Fcf2 domain-containing protein. (227 aa)
PV10_07480Uncharacterized protein. (708 aa)
PV10_0736518S rRNA biogenesis protein RCL1. (405 aa)
PV10_08488Uncharacterized protein. (761 aa)
PV10_04622RIO domain-containing protein. (392 aa)
PV10_02365WD_REPEATS_REGION domain-containing protein. (934 aa)
PV10_039995'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1407 aa)
PV10_04982Ribonuclease P protein subunit. (243 aa)
PV10_02892RNase III domain-containing protein. (304 aa)
PV10_00501U3 small nucleolar RNA-associated protein 22. (1140 aa)
PV10_01163rRNA 2'-O-methyltransferase fibrillarin. (326 aa)
PV10_01310C2H2-type domain-containing protein. (637 aa)
PV10_01510Utp12 domain-containing protein. (894 aa)
PV10_01668Uncharacterized protein. (931 aa)
B0A52_01222H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (218 aa)
PV10_03378BP28CT domain-containing protein. (1838 aa)
PV10_03347Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (386 aa)
PV10_01314Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (258 aa)
PV10_07168Exonuclease domain-containing protein. (733 aa)
PV10_07133Uncharacterized protein. (350 aa)
PV10_08688Zn(2)-C6 fungal-type domain-containing protein. (754 aa)
PV10_08657Uncharacterized protein. (489 aa)
PV10_00184WD_REPEATS_REGION domain-containing protein. (533 aa)
PV10_09194Brix domain-containing protein. (296 aa)
PV10_03474Uncharacterized protein. (457 aa)
PV10_00469Uncharacterized protein. (384 aa)
PV10_00870WD_REPEATS_REGION domain-containing protein. (1063 aa)
PV10_01786Bms1-type G domain-containing protein. (1173 aa)
PV10_09001Zn(2)-C6 fungal-type domain-containing protein. (728 aa)
PV10_09023Fungal_trans domain-containing protein. (842 aa)
PV10_07963Kri1_C domain-containing protein. (597 aa)
PV10_08401U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (762 aa)
PV10_08444Uncharacterized protein. (809 aa)
PV10_08540Uncharacterized protein. (283 aa)
PV10_07082Uncharacterized protein. (226 aa)
PV10_07495Nop domain-containing protein. (521 aa)
PV10_05821Centromere/microtubule-binding protein cbf5. (485 aa)
PV10_06511Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (581 aa)
PV10_0659820S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (433 aa)
PV10_03701Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
PV10_04384Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (362 aa)
PV10_04767Uncharacterized protein. (260 aa)
PV10_05266Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (350 aa)
PV10_028385'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1019 aa)
PV10_02871Nucleolar protein 58. (624 aa)
B0A52_07527rRNA-processing protein FCF1. (193 aa)
B0A52_09227S4 RNA-binding domain-containing protein. (188 aa)
PV10_03656Uncharacterized protein. (370 aa)
PV10_01518Importin N-terminal domain-containing protein. (1099 aa)
PV10_01591Zn(2)-C6 fungal-type domain-containing protein. (757 aa)
PV10_08169Uncharacterized protein. (128 aa)
PV10_08407Uncharacterized protein. (439 aa)
PV10_07946Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (272 aa)
PV10_08687Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (460 aa)
PV10_08711Uncharacterized protein. (417 aa)
PV10_08181Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (372 aa)
B0A52_01786Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (334 aa)
PV10_07197Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4842 aa)
PV10_07749WD_REPEATS_REGION domain-containing protein. (973 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
PV10_07293Uncharacterized protein. (1034 aa)
PV10_07470Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
PV10_05496Uncharacterized protein. (133 aa)
PV10_07821TAP-C domain-containing protein. (411 aa)
PV10_05521Uncharacterized protein. (449 aa)
PV10_05602GAR domain-containing protein. (1123 aa)
PV10_06744WD_REPEATS_REGION domain-containing protein. (889 aa)
PV10_04245WD_REPEATS_REGION domain-containing protein. (632 aa)
PV10_0377860S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (514 aa)
PV10_04635Spindle pole body component. (752 aa)
PV10_04922Uncharacterized protein. (116 aa)
PV10_04173tRNA pseudouridine(55) synthase. (427 aa)
PV10_05257zf-C2H2_2 domain-containing protein. (318 aa)
B0A52_08726GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
PV10_01373CP-type G domain-containing protein. (550 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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