STRINGSTRING
PV10_02139 PV10_02139 PV10_01566 PV10_01566 LSM4 LSM4 PV10_00085 PV10_00085 PV10_00060 PV10_00060 PV10_03028 PV10_03028 PV10_02965 PV10_02965 PV10_02697 PV10_02697 PV10_02427 PV10_02427 PV10_02015 PV10_02015 LSM3 LSM3 PV10_04883 PV10_04883 PV10_04646 PV10_04646 PV10_04631 PV10_04631 PV10_04514 PV10_04514 B0A52_10116 B0A52_10116 PV10_06593 PV10_06593 PV10_06507 PV10_06507 PV10_06311 PV10_06311 PV10_05979 PV10_05979 PV10_05874 PV10_05874 PV10_05785 PV10_05785 PV10_01902 PV10_01902 PV10_01740 PV10_01740 PV10_07898 PV10_07898 PV10_07861 PV10_07861 B0A52_06108 B0A52_06108 PV10_01386 PV10_01386 PV10_07679 PV10_07679 PV10_01096 PV10_01096 PV10_01076 PV10_01076 PV10_00661 PV10_00661 PV10_06965 PV10_06965 PV10_00555 PV10_00555 PV10_08764 PV10_08764 PV10_03578 PV10_03578 PV10_03505 PV10_03505 PV10_00332 PV10_00332 PV10_08258 PV10_08258 PV10_08244 PV10_08244 PV10_00294 PV10_00294 LSM8 LSM8 PV10_03365 PV10_03365 PV10_03284 PV10_03284 PV10_03210 PV10_03210 PV10_03604 PV10_03604 PV10_08998 PV10_08998 PV10_02811 PV10_02811 PV10_02521 PV10_02521 PV10_02426 PV10_02426 PV10_02401 PV10_02401 PV10_02363 PV10_02363 B0A52_09991 B0A52_09991 PV10_04832 PV10_04832 B0A52_01428 B0A52_01428 PV10_05262 PV10_05262 PV10_05086 PV10_05086 PV10_04028 PV10_04028 PV10_04605 PV10_04605 PV10_04326 PV10_04326 PV10_04272 PV10_04272 PV10_06734 PV10_06734 PV10_06657 PV10_06657 PV10_06548 PV10_06548 PV10_04121 PV10_04121 PV10_03803 PV10_03803 PV10_03744 PV10_03744 PV10_06403 PV10_06403 PV10_05684 PV10_05684 PV10_06140 PV10_06140 PV10_05868 PV10_05868 PV10_07460 PV10_07460 PV10_05468 PV10_05468 PV10_05390 PV10_05390 PV10_05343 PV10_05343 PV10_07768 PV10_07768 PV10_07523 PV10_07523 PV10_08223 PV10_08223 PV10_08215 PV10_08215 PV10_08855 PV10_08855 PV10_08116 PV10_08116 PV10_08012 PV10_08012 PV10_01656 PV10_01656 PV10_01232 PV10_01232 PV10_01126 PV10_01126 PV10_00383 PV10_00383 PV10_00293 PV10_00293 PV10_03222 PV10_03222 PV10_02944 PV10_02944 PV10_02680 PV10_02680 PV10_02538 PV10_02538 PV10_02508 PV10_02508 PV10_02149 PV10_02149 B0A52_09139 B0A52_09139 PV10_03701 PV10_03701 PV10_03684 PV10_03684 PV10_06654 PV10_06654 PV10_06240 PV10_06240 PV10_06099 PV10_06099 PV10_06021 PV10_06021 PV10_05797 PV10_05797 PV10_05389 PV10_05389 PV10_07725 PV10_07725 PV10_07635 PV10_07635 PV10_06919 PV10_06919 PV10_08907 PV10_08907 PV10_08406 PV10_08406 PV10_08073 PV10_08073 PV10_08011 PV10_08011 PV10_01325 PV10_01325 PV10_00642 PV10_00642 PV10_00297 PV10_00297 B0A52_07148 B0A52_07148 PV10_03250 PV10_03250 LSM5 LSM5 PV10_02433 PV10_02433 PV10_02366 PV10_02366 PV10_02022 PV10_02022 B0A52_05389 B0A52_05389 B0A52_08158 B0A52_08158 PV10_04721 PV10_04721 PV10_04648 PV10_04648 PV10_04520 PV10_04520 PV10_04109 PV10_04109 PV10_06653 PV10_06653 PV10_06376 PV10_06376 PV10_06286 PV10_06286 PV10_06239 PV10_06239 PV10_06213 PV10_06213 PV10_06133 PV10_06133 PV10_05962 PV10_05962 B0A52_05749 B0A52_05749 PV10_07511 PV10_07511 PV10_07318 PV10_07318 PV10_08036 PV10_08036 PV10_09000 PV10_09000
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_02139Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1078 aa)
PV10_01566Slu7 domain-containing protein. (514 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (127 aa)
PV10_00085SF3b1 domain-containing protein. (1213 aa)
PV10_00060RRM domain-containing protein. (214 aa)
PV10_03028RRM domain-containing protein. (200 aa)
PV10_02965Uncharacterized protein. (268 aa)
PV10_02697CID domain-containing protein. (859 aa)
PV10_02427Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1419 aa)
PV10_02015Pre-mRNA-splicing ATP-dependent RNA helicase prp28. (809 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
PV10_04883RRM domain-containing protein. (252 aa)
PV10_04646Uncharacterized protein. (252 aa)
PV10_04631Pre-mRNA-splicing factor prp46. (441 aa)
PV10_04514Uncharacterized protein. (473 aa)
B0A52_10116Small nuclear ribonucleoprotein Sm D3. (116 aa)
PV10_06593Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1065 aa)
PV10_06507Tudor domain-containing protein. (299 aa)
PV10_06311Phosducin domain-containing protein. (244 aa)
PV10_05979Uncharacterized protein. (286 aa)
PV10_05874ATP-dependent RNA helicase sub2. (440 aa)
PV10_05785Uncharacterized protein. (155 aa)
PV10_01902F-box domain-containing protein. (606 aa)
PV10_01740RRM domain-containing protein. (155 aa)
PV10_07898Uncharacterized protein; Belongs to the DEAD box helicase family. (516 aa)
PV10_07861Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (132 aa)
B0A52_06108ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. (399 aa)
PV10_01386Pre-mRNA-splicing factor rse1. (1211 aa)
PV10_07679ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (468 aa)
PV10_01096Uncharacterized protein. (832 aa)
PV10_01076Uncharacterized protein. (209 aa)
PV10_00661Zn(2)-C6 fungal-type domain-containing protein. (725 aa)
PV10_06965Uncharacterized protein. (715 aa)
PV10_00555Uncharacterized protein. (291 aa)
PV10_08764Uncharacterized protein. (1070 aa)
PV10_03578Pre-mRNA-processing-splicing factor 8, variant. (2356 aa)
PV10_03505Sm domain-containing protein. (140 aa)
PV10_00332Uncharacterized protein. (793 aa)
PV10_08258Matrin-type domain-containing protein. (238 aa)
PV10_08244Uncharacterized protein; Belongs to the heat shock protein 70 family. (574 aa)
PV10_00294Uncharacterized protein. (110 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
PV10_03365Uncharacterized protein. (861 aa)
PV10_03284RRM domain-containing protein. (283 aa)
PV10_03210Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1119 aa)
PV10_03604DUF1716 domain-containing protein. (607 aa)
PV10_08998Uncharacterized protein. (543 aa)
PV10_02811Pre-mRNA-splicing factor cwc15. (229 aa)
PV10_02521Uncharacterized protein. (568 aa)
PV10_02426Uncharacterized protein. (757 aa)
PV10_02401Uncharacterized protein. (653 aa)
PV10_02363Uncharacterized protein. (592 aa)
B0A52_09991Sm domain-containing protein. (223 aa)
PV10_04832Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle. (252 aa)
B0A52_01428Small nuclear ribonucleoprotein Sm D2. (114 aa)
PV10_05262Uncharacterized protein. (253 aa)
PV10_05086Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (800 aa)
PV10_04028Hsp72-like protein; Belongs to the heat shock protein 70 family. (676 aa)
PV10_04605Uncharacterized protein. (773 aa)
PV10_04326Uncharacterized protein. (664 aa)
PV10_04272PPIase cyclophilin-type domain-containing protein. (621 aa)
PV10_06734CID domain-containing protein. (502 aa)
PV10_06657Uncharacterized protein. (990 aa)
PV10_06548Uncharacterized protein. (983 aa)
PV10_04121Uncharacterized protein. (1134 aa)
PV10_03803Uncharacterized protein. (250 aa)
PV10_03744Uncharacterized protein. (251 aa)
PV10_06403Nuclear cap-binding protein subunit 2. (175 aa)
PV10_05684Uncharacterized protein. (160 aa)
PV10_06140Uncharacterized protein. (639 aa)
PV10_05868Uncharacterized protein. (203 aa)
PV10_07460Uncharacterized protein. (2229 aa)
PV10_05468Uncharacterized protein. (1048 aa)
PV10_05390Uncharacterized protein. (849 aa)
PV10_05343Uncharacterized protein. (589 aa)
PV10_07768RRM domain-containing protein. (166 aa)
PV10_07523U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (571 aa)
PV10_08223Uncharacterized protein. (1189 aa)
PV10_08215G-patch domain-containing protein. (534 aa)
PV10_08855WD_REPEATS_REGION domain-containing protein. (360 aa)
PV10_08116Uncharacterized protein. (770 aa)
PV10_08012Nop domain-containing protein. (602 aa)
PV10_01656CPSF_A domain-containing protein. (1308 aa)
PV10_01232Matrin-type domain-containing protein. (520 aa)
PV10_01126Uncharacterized protein. (386 aa)
PV10_00383Uncharacterized protein. (89 aa)
PV10_00293Pre-mRNA-splicing factor slt11. (374 aa)
PV10_03222Uncharacterized protein. (978 aa)
PV10_02944PSP domain-containing protein. (576 aa)
PV10_02680Uncharacterized protein. (578 aa)
PV10_02538Uncharacterized protein. (584 aa)
PV10_02508C2H2-type domain-containing protein. (216 aa)
PV10_02149RING-type domain-containing protein. (521 aa)
B0A52_09139RRM domain-containing protein. (116 aa)
PV10_03701Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
PV10_03684RRM domain-containing protein. (173 aa)
PV10_06654Tr-type G domain-containing protein. (982 aa)
PV10_06240Uncharacterized protein. (204 aa)
PV10_06099Uncharacterized protein. (771 aa)
PV10_06021SNRNP27 domain-containing protein. (247 aa)
PV10_05797Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (165 aa)
PV10_05389Uncharacterized protein. (336 aa)
PV10_07725Uncharacterized protein. (479 aa)
PV10_07635Uncharacterized protein. (977 aa)
PV10_06919Small nuclear ribonucleoprotein G. (81 aa)
PV10_08907Uncharacterized protein. (734 aa)
PV10_08406WD_REPEATS_REGION domain-containing protein. (347 aa)
PV10_08073Uncharacterized protein. (156 aa)
PV10_08011Pre-mRNA-splicing factor clf1. (675 aa)
PV10_01325Uncharacterized protein. (379 aa)
PV10_00642Uncharacterized protein. (210 aa)
PV10_00297Uncharacterized protein. (220 aa)
B0A52_07148U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
PV10_03250Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (192 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (84 aa)
PV10_02433Sm domain-containing protein. (113 aa)
PV10_02366G-patch_2 domain-containing protein. (472 aa)
PV10_02022WD_REPEATS_REGION domain-containing protein. (573 aa)
B0A52_05389Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
B0A52_08158Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
PV10_04721Uncharacterized protein. (1241 aa)
PV10_04648Pre-mRNA-splicing factor syf1. (862 aa)
PV10_04520RRM domain-containing protein. (401 aa)
PV10_04109Pre-mRNA-processing protein 45. (585 aa)
PV10_06653Hsp75-like protein; Belongs to the heat shock protein 70 family. (614 aa)
PV10_06376Uncharacterized protein. (918 aa)
PV10_06286WD_REPEATS_REGION domain-containing protein. (519 aa)
PV10_06239Uncharacterized protein. (424 aa)
PV10_06213Potassium/sodium efflux P-type ATPase, fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1069 aa)
PV10_06133Uncharacterized protein. (2337 aa)
PV10_05962RRM domain-containing protein. (332 aa)
B0A52_05749PHD finger-like domain-containing protein 5A. (109 aa)
PV10_07511Uncharacterized protein. (328 aa)
PV10_07318Uncharacterized protein. (768 aa)
PV10_08036Uncharacterized protein. (185 aa)
PV10_09000Uncharacterized protein. (247 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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