STRINGSTRING
AKB63219.1 AKB63219.1 AKB63249.1 AKB63249.1 AKB63250.1 AKB63250.1 AKB63289.1 AKB63289.1 AKB63393.1 AKB63393.1 secE secE AKB63493.1 AKB63493.1 AKB63592.1 AKB63592.1 AKB63628.1 AKB63628.1 AKB63647.1 AKB63647.1 AKB63648.1 AKB63648.1 AKB63858.1 AKB63858.1 AKB63859.1 AKB63859.1 AKB63916.1 AKB63916.1 AKB63917.1 AKB63917.1 AKB64051.1 AKB64051.1 tiaS tiaS AKB64055.1 AKB64055.1 AKB64113.1 AKB64113.1 AKB64203.1 AKB64203.1 AKB64204.1 AKB64204.1 AKB64665.1 AKB64665.1 AKB64788.1 AKB64788.1 AKB64804.1 AKB64804.1 AKB64868.1 AKB64868.1 AKB64875.1 AKB64875.1 AKB65124.1 AKB65124.1 AKB65191.1 AKB65191.1 AKB65520.1 AKB65520.1 AKB65521.1 AKB65521.1 AKB65529.1 AKB65529.1 AKB65530.1 AKB65530.1 AKB65531.1 AKB65531.1 AKB65538.1 AKB65538.1 AKB65679.1 AKB65679.1 AKB65680.1 AKB65680.1 AKB65706.1 AKB65706.1 AKB65728.1 AKB65728.1 secY secY dacZ dacZ AKB66123.1 AKB66123.1 AKB66124.1 AKB66124.1 AKB66190.1 AKB66190.1 AKB66452.1 AKB66452.1 AKB66458.1 AKB66458.1 AKB66515.1 AKB66515.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKB63219.1Archaeosine tRNA-ribosyltransferase type 2. (623 aa)
AKB63249.1Xanthine-guanine phosphoribosyltransferase. (224 aa)
AKB63250.1Zn-ribbon containing protein. (147 aa)
AKB63289.1Histone acetyltransferase, ELP3 family. (346 aa)
AKB63393.1Phosphoserine phosphatase. (285 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (71 aa)
AKB63493.1Hypothetical protein. (280 aa)
AKB63592.1Hypothetical protein. (297 aa)
AKB63628.1RecB family exonuclease. (272 aa)
AKB63647.1AAA family ATPase; Belongs to the AAA ATPase family. (428 aa)
AKB63648.1Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein. (246 aa)
AKB63858.1Oligosaccharyl transferase. (840 aa)
AKB63859.1Oligosaccharyl transferase. (840 aa)
AKB63916.1Hypothetical protein; Belongs to the UPF0179 family. (149 aa)
AKB63917.1Hypothetical protein. (214 aa)
AKB64051.1Hypothetical protein. (84 aa)
tiaSOB-fold nucleic acid binding domain protein; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA. (449 aa)
AKB64055.1HTH DNA-binding protein. (327 aa)
AKB64113.1Hypothetical protein. (137 aa)
AKB64203.1Replication protein A (two OB fold, one zinc finger). (421 aa)
AKB64204.1Hypothetical protein. (189 aa)
AKB64665.1Hypothetical protein. (284 aa)
AKB64788.1Transcriptional regulator. (138 aa)
AKB64804.1Hypothetical protein. (664 aa)
AKB64868.1Sterol-regulatory element-binding protein intramembrane protease. (594 aa)
AKB64875.1Hypothetical protein. (636 aa)
AKB65124.1Hypothetical protein. (469 aa)
AKB65191.1ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase. (163 aa)
AKB65520.1Hypothetical protein. (167 aa)
AKB65521.1Hypothetical protein. (288 aa)
AKB65529.1Hypothetical protein. (170 aa)
AKB65530.1Hypothetical protein. (119 aa)
AKB65531.1GTPase Era. (213 aa)
AKB65538.1Hypothetical protein; Belongs to the UPF0212 family. (129 aa)
AKB65679.1Hypothetical protein. (832 aa)
AKB65680.1Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase). (488 aa)
AKB65706.1KEOPS complex Cgi121-like subunit. (174 aa)
AKB65728.1Hypothetical protein. (206 aa)
secYPreprotein translocase secY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (491 aa)
dacZHypothetical protein; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation. (291 aa)
AKB66123.1Glycerol dehydrogenase. (289 aa)
AKB66124.1Replication factor-A protein 1. (453 aa)
AKB66190.1Signal peptidase, type IV - prepilin/preflagellin. (254 aa)
AKB66452.1Hypothetical protein. (331 aa)
AKB66458.1Archaeosortase A. (289 aa)
AKB66515.1Signal peptidase I. (185 aa)
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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