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YPO0770 YPO0770 YPO0771 YPO0771 YPO0772 YPO0772 YPO0773 YPO0773 YPO0774 YPO0774 YPO0775 YPO0775 YPO0776 YPO0776 YPO0777 YPO0777 YPO0778 YPO0778 aas aas YPO1462 YPO1462 fyuA fyuA irp5 irp5 irp4 irp4 irp3 irp3 irp1 irp1 irp2 irp2 ybtA ybtA irp6 irp6 irp7 irp7 irp8 irp8 irp9 irp9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YPO0770ABC-transporter transmembrane protein; Similar to Yersinia enterocolitica,high-pathogenicity island, lipoprotein inner membrane ABC-transporter, Irp6 TR:Q9X9I5 (EMBL:AJ132668) (600 aa) fasta scores: E(): 0, 30.8% id in 582 aa, and to Yersinia pestis hypothetical protein YbtQ TR:Q9Z375 (EMBL:AL031866) (600 aa) fasta scores: E(): 0, 33.7% id in 594 aa. (585 aa)
YPO0771ABC-transporter transmembrane protein; Similar to Yersinia enterocolitica,high-pathogenicity island, lipoprotein inner membrane ABC-transporter, Irp6 TR:Q9X9I5 (EMBL:AJ132668) (600 aa) fasta scores: E(): 0, 32.4% id in 574 aa, and to Yersinia pestis hypothetical protein protein YbtP TR:Q9R7V3 (EMBL:AL031866) (600 aa) fasta scores: E(): 0, 32.6% id in 574 aa. (590 aa)
YPO0772Putative membrane protein; Similar to Yersinia enterocolitica,high-pathogenicity island, signal transducer protein Irp8 TR:Q9X9I7 (EMBL:AJ132668) (462 aa) fasta scores: E(): 3.9e-22, 27.9% id in 416 aa, and to Yersinia pestis protein hypothetical protein YbtX TR:Q9ZC28 (EMBL:AL031866) (462 aa) fasta scores: E(): 8e-22, 27.1% id in 421 aa. (434 aa)
YPO0773Putative thioesterase; Similar to Pseudomonas aeruginosa probable pyochelin biosynthetic protein PchC TR:AAG07617 (EMBL:AE004840) (251 aa) fasta scores: E(): 1.1e-30, 38.6% id in 236 aa, and to C-terminus of Streptomyces griseus probable cadicidin biosynthesis thioesterase SW:PABT_STRGR (P33586) (361 aa) fasta scores: E(): 6e-25, 36.4% id in 225 aa. (254 aa)
YPO0774Conserved hypothetical protein; Similar to Yersinia enterocolitica high-pathogenicity island protein Irp3 TR:O54512 (EMBL:Y12527) (365 aa) fasta scores: E(): 3.6e-30, 33.7% id in 362 aa, and to Yersinia pestis YbtU protein ybtU TR:Q9Z3C6 (EMBL:AL031866) (365 aa) fasta scores: E(): 3.6e-30, 33.8% id in 364 aa. (375 aa)
YPO0775Conserved hypothetical protein; Similar to Corynebacterium diphtheriae DtxR/iron-regulated protein 2 Irp2 TR:Q46024 (EMBL:U02634) (369 aa) fasta scores: E(): 2.2e-06, 23.3% id in 339 aa. N-terminal region similar to N-terminus of Pseudomonas aeruginosa hypothetical protein PA4362 TR:AAG07750 (EMBL:AE004852) (352 aa) fasta scores: E(): 0.054, 27.8% id in 209 aa. (358 aa)
YPO0776Putative siderophore biosysnthesis protein; Similar to N-terminus of Yersinia pestis yersiniabactin biogenesis protein Irp2 TR:Q9Z399 (EMBL:AL031866) (2041 aa) fasta scores: E(): 0, 31.1% id in 1659 aa, and to Pseudomonas aeruginosa pyochelin synthetase PchF TR:Q9RFM7 (EMBL:AF184622) (1809 aa) fasta scores: E(): 0, 34.1% id in 1957 aa. and to Vibrio anguillarum anguibactin biosynthesis protein AngR SW:ANGR_VIBAN (P19828) (1048 aa) fasta scores: E(): 0, 32.1% id in 844 aa. CDS contains a glutamine and threonine rich imperfect repeat region, residues 996 to 1065. (1939 aa)
YPO0777Putative siderophore biosysnthesis protein; Similar to the C-terminus of Vibrio anguillarum anguibactin biosynthesis protein AngR SW:ANGR_VIBAN (P19828) (1048 aa) fasta scores: E(): 0, 40.7% id in 553 aa. N-terminus of the CDS is similar to an internal region of Yersinia pestis yersiniabactin biogenesis protein Irp2 TR:Q9Z399 (EMBL:AL031866) (2041 aa) fasta scores: E(): 0,45.1% id in 439 aa. (550 aa)
YPO0778Putative siderophore biosysnthesis protein; Similar to Yersinia pestis yersiniabactin biogenesis protein Irp2 TR:Q9Z399 (EMBL:AL031866) (2041 aa) fasta scores: E(): 0, 36.8% id in 2031 aa, and to C-terminus of Stigmatella aurantiaca myxothiazol biosynthetic protein MtaD TR:Q9RFK8 (EMBL:AF188287) (3291 aa) fasta scores: E(): 0, 32.0% id in 1435 aa. (2201 aa)
aasAas bifunctional protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1. (718 aa)
YPO1462Similar to Escherichia coli acyl carrier protein AcpP SW:ACP_ECOLI (P02901) (77 aa) fasta scores: E(): 0.12,33.3% id in 63 aa, and to Vibrio marinus acyl carrier protein AcpP TR:Q9RA32 (EMBL:AB021978) (78 aa) fasta scores: E(): 0.0026, 38.4% id in 73 aa. (82 aa)
fyuAPesticin/yersiniabactin receptor protein; Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin. (673 aa)
irp5Previously sequenced: Yersinia pestis yersiniabactin siderophore biosynthetic protein YbtE TR:Q56950 (EMBL:U50364) (525 aa) fasta scores: E(): 0, 100.0% id in 525 aa. Similar to Yersinia enterocolitica Irp5 protein TR:O54514 (EMBL:Y12527) (525 aa) fasta scores: E(): 0,97.9% id in 525 aa. (525 aa)
irp4Similar to the previously sequenced Yersinia pestis yersiniabactin biosynthetic protein YbtT TR:Q56949 (EMBL:U50364) (267 aa) fasta scores: E(): 0, 99.6% id in 267 aa, and to Yersinia enterocolitica Irp4 protein TR:O54513 (EMBL:Y12527) (267 aa) fasta scores: E(): 0,95.5% id in 267 aa. (267 aa)
irp3Previously sequenced as Yersinia pestis yersiniabactin biosynthetic protein YbtU TR:Q9Z3C6 (EMBL:AL031866) (365 aa) fasta scores: E(): 0, 100.0% id in 365 aa. Similar to Yersinia enterocolitica Irp3 protein TR:O54512 (EMBL:Y12527) (365 aa) fasta scores: E(): 0,97.8% id in 365 aa. (366 aa)
irp1Previously sequenced as Yersinia pestis yersiniabactin biosynthetic protein Irp1 TR:Q9Z373 (EMBL:AL031866) (3163 aa) fasta scores: E(): 0, 100.0% id in 3163 aa. Similar to Yersinia enterocolitica HMWP1 protein Irp1 TR:O54511 (EMBL:Y12527) (3161 aa) fasta scores: E(): 0, 97.9% id in 3163 aa. (3163 aa)
irp2Previously sequenced as Yersinia pestis yersiniabactin biosynthetic protein Irp2 TR:Q9Z399 (EMBL:AL031866) (2041 aa) fasta scores: E(): 0, 100.0% id in 2035 aa. Similar to Yersinia enterocolitica high-molecular-weight protein 2 Irp2 SW:HMP2_YEREN (P48633) (2035 aa) fasta scores: E(): 0, 98.6% id in 2035 aa. The previously sequenced Yersinia pestis Irp2 ORF starts at a valine situated 6 aa upstream from the methionine. However,the methionine start, has a good ribosome-binding site. (2035 aa)
ybtATranscriptional regulator YbtA; Previously sequenced as Yersinia pestis yersiniabactin transcriptional regulator YbtA TR:Q56951 (EMBL:U50452) (319 aa) fasta scores: E(): 0, 100.0% id in 319 aa. Similar to Yersinia enterocolitica yersiniabactin transcriptional regulator YbtA TR:Q9X9I4 (EMBL:AJ132668) (319 aa) fasta scores: E(): 0, 99.1% id in 319 aa. (319 aa)
irp6Previously sequenced as Yersinia pestis lipoprotein inner membrane ABC-transporter YbtP TR:Q9R7V3 (EMBL:AL031866) (600 aa) fasta scores: E(): 0, 100.0% id in 600 aa. Similar to Yersinia enterocolitica lipoprotein inner membrane ABC-transporter Irp6 TR:Q9X9I5 (EMBL:AJ132668) (600 aa) fasta scores: E(): 0, 98.0% id in 600 aa. (600 aa)
irp7Previously sequenced as Yersinia pestis inner membrane ABC-transporter YbtQ TR:Q9Z375 (EMBL:AL031866) (600 aa) fasta scores: E(): 0, 100.0% id in 600 aa. Similar to Yersinia enterocolitica inner membrane ABC-transporter Irp7 TR:Q9X9I6 (EMBL:AJ132668) (600 aa) fasta scores: E(): 0, 98.8% id in 600 aa. (600 aa)
irp8Putative signal transducer; Previously sequenced as Yersinia pestis putative signal transducer YbtX TR:Q9ZC28 (EMBL:AL031866) (462 aa) fasta scores: E(): 0, 100.0% id in 426 aa. similar to Yersinia enterocolitica signal transducer Irp8 TR:Q9X9I7 (EMBL:AJ132668) (462 aa) fasta scores: E(): 0, 98.1% id in 426 aa. There is a discrepancy with the start codon. The previously sequenced Y.pestis and Y. enterocolitica ORFs start at a methionine 36 aa upstream of the predicted start for this CDS. The selection for the alternative downstream methionine start codon for this CDS was supported by Y [...] (426 aa)
irp9Previously sequenced as Yersinia pestis putative salicylate synthetase YbtS TR:Q9Z396 (EMBL:AL031866) (434 aa) fasta scores: E(): 0, 100.0% id in 434 aa. Similar to Yersinia enterocolitica salicylate synthetase Irp9 TR:Q9X9I8 (EMBL:AJ132668) (434 aa) fasta scores: E(): 0,99.3% id in 434 aa. (434 aa)
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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