STRINGSTRING
fla-8 fla-8 fla-7 fla-7 fla-6 fla-6 fla-4 fla-4 fla-3 fla-3 flgI flgI flgH flgH flgG flgG flgC flgC flgB flgB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fla-8Flagellar P-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (369 aa)
fla-7Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (229 aa)
fla-6Similar to Salmonella typhimurium flagellar basal-body rod protein FlgG or FlaL or Fla FVII SW:FLGG_SALTY (P16439) (260 aa) fasta scores: E(): 0, 89.2% id in 232 aa, and to Escherichia coli O157:H7 flagellar biosynthesis, cell-distal portion of basal-body rod FlgG TR:AAG55824 (EMBL:AE005318) (260 aa) fasta scores: E(): 0,88.8% id in 232 aa. This CDS is missing 24 amino acids at the N-terminal end. (232 aa)
fla-4Similar to Salmonella typhimurium flagellar basal-body rod protein FlgC or FlaW or Fla FIII SW:FLGC_SALTY (P16438) (134 aa) fasta scores: E(): 0, 79.9% id in 134 aa, and to Yersinia enterocolitica flagellar basal-body rod protein FlgC SW:FLGC_YEREN (Q56894) (134 aa) fasta scores: E(): 0, 96.3% id in 134 aa. (134 aa)
fla-3Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (137 aa)
flgIPutative flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (370 aa)
flgHPutative flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (221 aa)
flgGSimilar to Escherichia coli flagellar basal-body rod protein FlgG SW:FLGG_ECOLI (P75939) (260 aa) fasta scores: E(): 0, 50.2% id in 259 aa, and to Pseudomonas aeruginosa flagellar basal-body rod protein FlgG TR:AAG04471 (EMBL:AE004539) (261 aa) fasta scores: E(): 0, 52.5% id in 261 aa. (261 aa)
flgCSimilar to Escherichia coli flagellar basal-body rod protein FlgC SW:FLGC_ECOLI (P75935) (134 aa) fasta scores: E(): 5.2e-17, 46.1% id in 141 aa, and to Vibrio parahaemolyticus possible flagellar basal-body rod protein LfgC TR:Q56720 (EMBL:U51896) (144 aa) fasta scores: E(): 6.8e-28, 57.0% id in 142 aa. (141 aa)
flgBPutative flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (148 aa)
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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