STRINGSTRING
fla-5 fla-5 fla-6 fla-6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fla-5Similar to Salmonella typhimurium flagellar basal-body rod protein FlgF or FlaX or Fla FVI SW:FLGF_SALTY (P16323) (251 aa) fasta scores: E(): 0, 64.5% id in 200 aa, and to Escherichia coli flagellar basal-body rod protein FlgF or FlaX or Fla FVI SW:FLGF_ECOLI (P75938) (251 aa) fasta scores: E(): 0, 64.5% id in 200 aa. This CDS is approx. 40 amino acids shorter (at the C-terminal end) than the S. typhimurium and E.coli FlgF. (209 aa)
fla-6Similar to Salmonella typhimurium flagellar basal-body rod protein FlgG or FlaL or Fla FVII SW:FLGG_SALTY (P16439) (260 aa) fasta scores: E(): 0, 89.2% id in 232 aa, and to Escherichia coli O157:H7 flagellar biosynthesis, cell-distal portion of basal-body rod FlgG TR:AAG55824 (EMBL:AE005318) (260 aa) fasta scores: E(): 0,88.8% id in 232 aa. This CDS is missing 24 amino acids at the N-terminal end. (232 aa)
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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