(18 nodes) TRAPP complex network (Exophiala oligosperma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV06_08630	Uncharacterized protein. (758 aa)
	PV06_02969	Trafficking protein particle complex subunit BET3. (192 aa)
	PV06_01814	Protein YOP1. (375 aa)
	PV06_00346	Uncharacterized protein. (219 aa)
	PV06_00819	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (165 aa)
	PV06_06821	Uncharacterized protein. (172 aa)
	PV06_00196	Uncharacterized protein. (251 aa)
	PV06_00694	Uncharacterized protein. (149 aa)
	PV06_10862	Uncharacterized protein. (592 aa)
	PV06_10956	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (267 aa)
	PV06_10117	Uncharacterized protein. (178 aa)
	PV06_09523	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (188 aa)
	PV06_10039	Uncharacterized protein. (1243 aa)
	PV06_08979	Uncharacterized protein. (456 aa)
	PV06_06875	Uncharacterized protein. (334 aa)
	PV06_05731	Uncharacterized protein. (1342 aa)
	PV06_05986	Rab-GAP TBC domain-containing protein. (948 aa)
	PV06_06398	Uncharacterized protein. (1412 aa)

Your Current Organism:

Exophiala oligosperma

NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV06_00196	PV06_00819	A0A0D2CC65	A0A0D2B7J0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.983
PV06_00196	PV06_02969	A0A0D2CC65	A0A0D2AXK6	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.985
PV06_00196	PV06_05731	A0A0D2CC65	A0A0D2E2Z4	Uncharacterized protein.	Uncharacterized protein.	0.980
PV06_00196	PV06_06398	A0A0D2CC65	A0A0D2E513	Uncharacterized protein.	Uncharacterized protein.	0.977
PV06_00196	PV06_06821	A0A0D2CC65	A0A0D2BUV7	Uncharacterized protein.	Uncharacterized protein.	0.982
PV06_00196	PV06_06875	A0A0D2CC65	A0A0D2DE08	Uncharacterized protein.	Uncharacterized protein.	0.807
PV06_00196	PV06_08630	A0A0D2CC65	A0A0D2AF03	Uncharacterized protein.	Uncharacterized protein.	0.982
PV06_00196	PV06_08979	A0A0D2CC65	A0A0D2D7R1	Uncharacterized protein.	Uncharacterized protein.	0.866
PV06_00196	PV06_09523	A0A0D2CC65	A0A0D2D5X9	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.982
PV06_00196	PV06_10039	A0A0D2CC65	A0A0D2D6S0	Uncharacterized protein.	Uncharacterized protein.	0.943
PV06_00196	PV06_10117	A0A0D2CC65	A0A0D2D4J4	Uncharacterized protein.	Uncharacterized protein.	0.983
PV06_00196	PV06_10862	A0A0D2CC65	A0A0D2D0Z8	Uncharacterized protein.	Uncharacterized protein.	0.942
PV06_00196	PV06_10956	A0A0D2CC65	A0A0D2D3G2	Uncharacterized protein.	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	0.982
PV06_00346	PV06_00819	A0A0D2B5X8	A0A0D2B7J0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.968
PV06_00346	PV06_02969	A0A0D2B5X8	A0A0D2AXK6	Uncharacterized protein.	Trafficking protein particle complex subunit BET3.	0.969
PV06_00346	PV06_05731	A0A0D2B5X8	A0A0D2E2Z4	Uncharacterized protein.	Uncharacterized protein.	0.952
PV06_00346	PV06_06398	A0A0D2B5X8	A0A0D2E513	Uncharacterized protein.	Uncharacterized protein.	0.956
PV06_00346	PV06_06821	A0A0D2B5X8	A0A0D2BUV7	Uncharacterized protein.	Uncharacterized protein.	0.969
PV06_00346	PV06_06875	A0A0D2B5X8	A0A0D2DE08	Uncharacterized protein.	Uncharacterized protein.	0.807
PV06_00346	PV06_08630	A0A0D2B5X8	A0A0D2AF03	Uncharacterized protein.	Uncharacterized protein.	0.968