28 items (Exophiala oligosperma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV06_07026	WD_REPEATS_REGION domain-containing protein. (559 aa)
	PV06_10227	Nucleolar protein 58. (634 aa)
	PV06_05182	Kri1_C domain-containing protein. (600 aa)
	PV06_06044	PINc domain-containing protein. (194 aa)
	PV06_06030	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (230 aa)
	PV06_07962	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	PV06_00364	WD_REPEATS_REGION domain-containing protein. (959 aa)
	PV06_08956	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (335 aa)
	PV06_08863	Brix domain-containing protein. (344 aa)
	PV06_01643	WD_REPEATS_REGION domain-containing protein. (865 aa)
	PV06_09274	RAI1 domain-containing protein. (395 aa)
	PV06_06284	WD_REPEATS_REGION domain-containing protein. (953 aa)
	PV06_06152	Uncharacterized protein. (272 aa)
	PV06_08086	Uncharacterized protein. (935 aa)
	PV06_08431	Bms1-type G domain-containing protein. (837 aa)
	PV06_08775	Uncharacterized protein. (1814 aa)
	PV06_10960	Uncharacterized protein. (363 aa)
	PV06_00858	Uncharacterized protein. (512 aa)
	PV06_00548	18S rRNA biogenesis protein RCL1. (406 aa)
	PV06_06163	Pre-rRNA-processing protein PNO1. (260 aa)
	PV06_07199	CBF domain-containing protein. (287 aa)
	PV06_09015	Uncharacterized protein. (356 aa)
	PV06_10959	Uncharacterized protein. (273 aa)
	PV06_00272	Fcf2 domain-containing protein. (227 aa)
	PV06_03689	Bms1-type G domain-containing protein. (1180 aa)
	PV06_05184	Uncharacterized protein. (452 aa)
	PV06_06280	WD_REPEATS_REGION domain-containing protein. (594 aa)
	PV06_07914	Uncharacterized protein. (766 aa)

Your Current Organism:

Exophiala oligosperma

NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV06_00272	PV06_00364	A0A0D2B5Q5	A0A0D2DYM5	Fcf2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.966
PV06_00272	PV06_00548	A0A0D2B5Q5	A0A0D2CDF2	Fcf2 domain-containing protein.	18S rRNA biogenesis protein RCL1.	0.980
PV06_00272	PV06_00858	A0A0D2B5Q5	A0A0D2CEC9	Fcf2 domain-containing protein.	Uncharacterized protein.	0.974
PV06_00272	PV06_01643	A0A0D2B5Q5	A0A0D2DTU2	Fcf2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.967
PV06_00272	PV06_03689	A0A0D2B5Q5	A0A0D2AZN7	Fcf2 domain-containing protein.	Bms1-type G domain-containing protein.	0.990
PV06_00272	PV06_05182	A0A0D2B5Q5	A0A0D2E8G7	Fcf2 domain-containing protein.	Kri1_C domain-containing protein.	0.751
PV06_00272	PV06_06030	A0A0D2B5Q5	A0A0D2E3Y0	Fcf2 domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.845
PV06_00272	PV06_06044	A0A0D2B5Q5	A0A0D2E420	Fcf2 domain-containing protein.	PINc domain-containing protein.	0.983
PV06_00272	PV06_06152	A0A0D2B5Q5	A0A0D2DJK2	Fcf2 domain-containing protein.	Uncharacterized protein.	0.570
PV06_00272	PV06_06163	A0A0D2B5Q5	A0A0D2BYT6	Fcf2 domain-containing protein.	Pre-rRNA-processing protein PNO1.	0.965
PV06_00272	PV06_06280	A0A0D2B5Q5	A0A0D2AS85	Fcf2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.969
PV06_00272	PV06_06284	A0A0D2B5Q5	A0A0D2DK03	Fcf2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.960
PV06_00272	PV06_07026	A0A0D2B5Q5	A0A0D2ANE3	Fcf2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.989
PV06_00272	PV06_07199	A0A0D2B5Q5	A0A0D2BW33	Fcf2 domain-containing protein.	CBF domain-containing protein.	0.972
PV06_00272	PV06_07914	A0A0D2B5Q5	A0A0D2AL39	Fcf2 domain-containing protein.	Uncharacterized protein.	0.568
PV06_00272	PV06_08086	A0A0D2B5Q5	A0A0D2DAP3	Fcf2 domain-containing protein.	Uncharacterized protein.	0.982
PV06_00272	PV06_08431	A0A0D2B5Q5	A0A0D2D9R8	Fcf2 domain-containing protein.	Bms1-type G domain-containing protein.	0.478
PV06_00272	PV06_08775	A0A0D2B5Q5	A0A0D2D954	Fcf2 domain-containing protein.	Uncharacterized protein.	0.933
PV06_00272	PV06_08863	A0A0D2B5Q5	A0A0D2DTX5	Fcf2 domain-containing protein.	Brix domain-containing protein.	0.773
PV06_00272	PV06_08956	A0A0D2B5Q5	A0A0D2DU67	Fcf2 domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.987