(57 nodes) Endosomal transport network (Exophiala oligosperma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV06_00911	Uncharacterized protein. (139 aa)
	PV06_00763	Uncharacterized protein. (536 aa)
	PV06_00032	Uncharacterized protein. (129 aa)
	PV06_02096	RIC1 domain-containing protein. (1047 aa)
	PV06_02035	Uncharacterized protein. (214 aa)
	PV06_03242	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (296 aa)
	PV06_03166	PX domain-containing protein. (631 aa)
	PV06_05318	Vps54 domain-containing protein. (1085 aa)
	PV06_04704	Uncharacterized protein. (537 aa)
	PV06_04660	Uncharacterized protein. (219 aa)
	PV06_06398	Uncharacterized protein. (1412 aa)
	PV06_06212	WD_REPEATS_REGION domain-containing protein. (1212 aa)
	PV06_01397	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (846 aa)
	PV06_07040	Uncharacterized protein. (671 aa)
	PV06_01018	Uncharacterized protein. (2028 aa)
	PV06_01174	GLUE N-terminal domain-containing protein. (607 aa)
	PV06_06543	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1363 aa)
	PV06_07405	Uncharacterized protein. (553 aa)
	PV06_00398	Vps53_N domain-containing protein. (864 aa)
	PV06_07322	PX domain-containing protein. (723 aa)
	PV06_07320	Uncharacterized protein. (326 aa)
	PV06_00050	Uncharacterized protein. (174 aa)
	PV06_02300	Uncharacterized protein. (858 aa)
	PV06_01685	Uncharacterized protein. (264 aa)
	PV06_02148	Uncharacterized protein. (188 aa)
	PV06_08684	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (830 aa)
	PV06_02944	Uncharacterized protein. (217 aa)
	PV06_10616	Uncharacterized protein. (220 aa)
	PV06_08632	Uncharacterized protein. (507 aa)
	PV06_09552	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. (603 aa)
	PV06_10166	GAR domain-containing protein. (1085 aa)
	PV06_10459	Uncharacterized protein. (342 aa)
	PV06_00651	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (255 aa)
	PV06_00590	BRO1 domain-containing protein. (1071 aa)
	PV06_04926	Uncharacterized protein. (660 aa)
	PV06_06426	Uncharacterized protein. (209 aa)
	PV06_05534	Uncharacterized protein. (1159 aa)
	PV06_07795	ENTH domain-containing protein. (543 aa)
	PV06_07529	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (242 aa)
	PV06_07433	N-acetyltransferase domain-containing protein. (230 aa)
	PV06_08078	Uncharacterized protein. (777 aa)
	PV06_08973	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (870 aa)
	PV06_09394	PX domain-containing protein. (601 aa)
	PV06_01436	Uncharacterized protein. (372 aa)
	PV06_00570	Uncharacterized protein. (206 aa)
	PV06_02763	Uncharacterized protein. (389 aa)
	PV06_02473	E3 ubiquitin-protein ligase. (805 aa)
	PV06_02445	UBIQUITIN_CONJUGAT_2 domain-containing protein. (1073 aa)
	PV06_03158	t-SNARE coiled-coil homology domain-containing protein. (229 aa)
	PV06_05064	Uncharacterized protein. (225 aa)
	PV06_05050	AAA domain-containing protein; Belongs to the AAA ATPase family. (468 aa)
	PV06_04715	Uncharacterized protein. (673 aa)
	PV06_04570	MPN domain-containing protein. (497 aa)
	PV06_04359	Uncharacterized protein; Belongs to the AAA ATPase family. (437 aa)
	PV06_09612	DAO domain-containing protein. (428 aa)
	PV06_10082	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (200 aa)
	PV06_09745	Uncharacterized protein. (322 aa)

Your Current Organism:

Exophiala oligosperma

NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV06_00032	PV06_00050	A0A0D2EH92	A0A0D2DW69	Uncharacterized protein.	Uncharacterized protein.	0.979
PV06_00050	PV06_00032	A0A0D2DW69	A0A0D2EH92	Uncharacterized protein.	Uncharacterized protein.	0.979
PV06_00398	PV06_03158	A0A0D2DXA2	A0A0D2AXZ1	Vps53_N domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.798
PV06_00398	PV06_05318	A0A0D2DXA2	A0A0D2E8T3	Vps53_N domain-containing protein.	Vps54 domain-containing protein.	0.999
PV06_00398	PV06_06426	A0A0D2DXA2	A0A0D2BZR1	Vps53_N domain-containing protein.	Uncharacterized protein.	0.893
PV06_00398	PV06_07040	A0A0D2DXA2	A0A0D2E128	Vps53_N domain-containing protein.	Uncharacterized protein.	0.992
PV06_00398	PV06_08078	A0A0D2DXA2	A0A0D2BPJ2	Vps53_N domain-containing protein.	Uncharacterized protein.	0.720
PV06_00398	PV06_10082	A0A0D2DXA2	A0A0D2AD35	Vps53_N domain-containing protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.426
PV06_00398	PV06_10459	A0A0D2DXA2	A0A0D2D268	Vps53_N domain-containing protein.	Uncharacterized protein.	0.999
PV06_00570	PV06_00651	A0A0D2B6Q0	A0A0D2CDY3	Uncharacterized protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.529
PV06_00570	PV06_00763	A0A0D2B6Q0	A0A0D2EJQ1	Uncharacterized protein.	Uncharacterized protein.	0.996
PV06_00570	PV06_01174	A0A0D2B6Q0	A0A0D2DZP8	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.545
PV06_00570	PV06_01436	A0A0D2B6Q0	A0A0D2B9J1	Uncharacterized protein.	Uncharacterized protein.	0.988
PV06_00570	PV06_02035	A0A0D2B6Q0	A0A0D2EEI7	Uncharacterized protein.	Uncharacterized protein.	0.922
PV06_00570	PV06_02148	A0A0D2B6Q0	A0A0D2DTM9	Uncharacterized protein.	Uncharacterized protein.	0.545
PV06_00570	PV06_02944	A0A0D2B6Q0	A0A0D2DNQ9	Uncharacterized protein.	Uncharacterized protein.	0.988
PV06_00570	PV06_04359	A0A0D2B6Q0	A0A0D2ATQ5	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.970
PV06_00570	PV06_04570	A0A0D2B6Q0	A0A0D2AUM2	Uncharacterized protein.	MPN domain-containing protein.	0.724
PV06_00570	PV06_04660	A0A0D2B6Q0	A0A0D2E6Z8	Uncharacterized protein.	Uncharacterized protein.	0.988
PV06_00570	PV06_05050	A0A0D2B6Q0	A0A0D2AW72	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.970