(43 nodes) SWI/SNF superfamily-type complex network (Exophiala oligosperma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV06_05070	Fungal_trans domain-containing protein. (929 aa)
	PV06_10357	Zn(2)-C6 fungal-type domain-containing protein. (652 aa)
	PV06_09693	Uncharacterized protein. (550 aa)
	PV06_06545	YL1_C domain-containing protein. (722 aa)
	PV06_06815	Uncharacterized protein. (943 aa)
	PV06_06904	Zn(2)-C6 fungal-type domain-containing protein. (803 aa)
	PV06_07066	Zn(2)-C6 fungal-type domain-containing protein. (770 aa)
	PV06_04637	Uncharacterized protein. (1123 aa)
	PV06_03021	Uncharacterized protein. (1612 aa)
	PV06_02151	PHD-type domain-containing protein. (902 aa)
	PV06_02184	SWIB domain-containing protein. (497 aa)
	PV06_00387	Uncharacterized protein. (643 aa)
	PV06_00562	Uncharacterized protein; Belongs to the actin family. (758 aa)
	PV06_08136	Uncharacterized protein. (684 aa)
	PV06_07804	Zn(2)-C6 fungal-type domain-containing protein. (716 aa)
	PV06_05754	Uncharacterized protein. (1697 aa)
	PV06_04746	Uncharacterized protein; Belongs to the actin family. (478 aa)
	PV06_04953	Uncharacterized protein. (276 aa)
	PV06_03164	Uncharacterized protein; Belongs to the actin family. (475 aa)
	PV06_01987	SANT domain-containing protein. (835 aa)
	PV06_00392	Uncharacterized protein. (1428 aa)
	PV06_09033	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (473 aa)
	PV06_07423	NET domain-containing protein. (247 aa)
	PV06_06534	Uncharacterized protein. (743 aa)
	PV06_05525	Zn(2)-C6 fungal-type domain-containing protein. (735 aa)
	PV06_05807	Uncharacterized protein. (815 aa)
	PV06_06181	Uncharacterized protein. (185 aa)
	PV06_04288	Uncharacterized protein. (835 aa)
	PV06_05142	YL1_C domain-containing protein. (198 aa)
	PV06_05137	Uncharacterized protein; Belongs to the actin family. (769 aa)
	PV06_03302	Uncharacterized protein. (432 aa)
	PV06_03172	Uncharacterized protein. (245 aa)
	PV06_03208	Uncharacterized protein. (361 aa)
	PV06_03438	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (456 aa)
	PV06_09510	Uncharacterized protein. (622 aa)
	PV06_02122	Uncharacterized protein. (684 aa)
	PV06_00480	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (737 aa)
	PV06_06606	Uncharacterized protein. (676 aa)
	PV06_07288	PAPA-1 domain-containing protein. (489 aa)
	PV06_05828	Uncharacterized protein. (1379 aa)
	PV06_04366	ARID domain-containing protein. (979 aa)
	PV06_05304	Zn(2)-C6 fungal-type domain-containing protein. (721 aa)
	PV06_02564	Uncharacterized protein. (514 aa)

Your Current Organism:

Exophiala oligosperma

NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV06_00387	PV06_00392	A0A0D2B616	A0A0D2CCT1	Uncharacterized protein.	Uncharacterized protein.	0.829
PV06_00387	PV06_00480	A0A0D2B616	A0A0D2DZ03	Uncharacterized protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.821
PV06_00387	PV06_00562	A0A0D2B616	A0A0D2B6N3	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.836
PV06_00387	PV06_02122	A0A0D2B616	A0A0D2DV58	Uncharacterized protein.	Uncharacterized protein.	0.462
PV06_00387	PV06_02151	A0A0D2B616	A0A0D2B2U2	Uncharacterized protein.	PHD-type domain-containing protein.	0.706
PV06_00387	PV06_02184	A0A0D2B616	A0A0D2B2Y9	Uncharacterized protein.	SWIB domain-containing protein.	0.998
PV06_00387	PV06_02564	A0A0D2B616	A0A0D2EG90	Uncharacterized protein.	Uncharacterized protein.	0.654
PV06_00387	PV06_03021	A0A0D2B616	A0A0D2AXN4	Uncharacterized protein.	Uncharacterized protein.	0.408
PV06_00387	PV06_03164	A0A0D2B616	A0A0D2C4J1	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.985
PV06_00387	PV06_03172	A0A0D2B616	A0A0D2DQD2	Uncharacterized protein.	Uncharacterized protein.	0.630
PV06_00387	PV06_03302	A0A0D2B616	A0A0D2DPV2	Uncharacterized protein.	Uncharacterized protein.	0.934
PV06_00387	PV06_04288	A0A0D2B616	A0A0D2DJI8	Uncharacterized protein.	Uncharacterized protein.	0.966
PV06_00387	PV06_04366	A0A0D2B616	A0A0D2E601	Uncharacterized protein.	ARID domain-containing protein.	0.782
PV06_00387	PV06_04637	A0A0D2B616	A0A0D2AUU4	Uncharacterized protein.	Uncharacterized protein.	0.422
PV06_00387	PV06_06181	A0A0D2B616	A0A0D2DI17	Uncharacterized protein.	Uncharacterized protein.	0.934
PV06_00387	PV06_06606	A0A0D2B616	A0A0D2DZS4	Uncharacterized protein.	Uncharacterized protein.	0.457
PV06_00387	PV06_06815	A0A0D2B616	A0A0D2AMQ2	Uncharacterized protein.	Uncharacterized protein.	0.782
PV06_00387	PV06_07423	A0A0D2B616	A0A0D2DCL7	Uncharacterized protein.	NET domain-containing protein.	0.630
PV06_00387	PV06_08136	A0A0D2B616	A0A0D2BPR8	Uncharacterized protein.	Uncharacterized protein.	0.997
PV06_00387	PV06_09510	A0A0D2B616	A0A0D2DSD9	Uncharacterized protein.	Uncharacterized protein.	0.966