69 items (Acaromyces ingoldii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316YB69	RNA-binding domain-containing protein. (115 aa)
	A0A316YCY1	Uncharacterized protein. (368 aa)
	A0A316YDN0	Uncharacterized protein. (344 aa)
	A0A316YF16	Cir_N domain-containing protein. (466 aa)
	A0A316YFA2	Cwf21-domain-containing protein. (172 aa)
	A0A316YFX6	Putative ATP dependent RNA helicase. (2230 aa)
	A0A316YG73	SMAD/FHA domain-containing protein. (265 aa)
	A0A316YG91	Uncharacterized protein. (987 aa)
	A0A316YIA4	P-loop containing nucleoside triphosphate hydrolase protein. (789 aa)
	A0A316YIB2	RNA-binding domain-containing protein. (160 aa)
	A0A316YIB8	WD40 repeat-like protein. (507 aa)
	A0A316YIK5	Splicing factor 3B subunit 5/RDS3 complex subunit 10. (78 aa)
	A0A316YIV6	Pre-mRNA splicing factor. (631 aa)
	A0A316YJ25	DUF572-domain-containing protein. (337 aa)
	A0A316YJ68	Small nuclear ribonucleoprotein G. (94 aa)
	A0A316YJA7	G10 protein. (148 aa)
	A0A316YJS1	P-loop containing nucleoside triphosphate hydrolase protein. (1313 aa)
	A0A316YJV4	TPR_REGION domain-containing protein. (1074 aa)
	A0A316YKA5	Uncharacterized protein. (254 aa)
	A0A316YL74	Putative ribosomal elongation factor EF-2. (1001 aa)
	A0A316YLS8	Prp18-domain-containing protein. (424 aa)
	A0A316YM92	RNA-binding domain-containing protein. (361 aa)
	A0A316YMB8	Uncharacterized protein. (1098 aa)
	A0A316YMH5	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (142 aa)
	A0A316YN63	RNA-binding domain-containing protein. (138 aa)
	A0A316YND7	CPSF_A domain-containing protein. (1233 aa)
	A0A316YNU6	Uncharacterized protein. (228 aa)
	A0A316YP27	Cwf15/Cwc15 cell cycle control protein. (295 aa)
	A0A316YP88	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A316YPD8	Small nuclear ribonucleoprotein Sm D3. (115 aa)
	A0A316YPF9	Uncharacterized protein. (455 aa)
	A0A316YPS7	P-loop containing nucleoside triphosphate hydrolase protein. (688 aa)
	A0A316YPV2	Putative splicing factor 3b subunit 1. (1189 aa)
	A0A316YPX6	Pre-mRNA-splicing factor CLF1. (780 aa)
	A0A316YQD9	DUF262 domain-containing protein. (430 aa)
	A0A316YQH7	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (120 aa)
	A0A316YQN0	Putative Pre-mRNA splicing factor ini1. (109 aa)
	A0A316YQS9	MIF4G-domain-containing protein. (821 aa)
	A0A316YR16	Slu7 domain-containing protein. (398 aa)
	A0A316YR73	WD40 repeat-like protein. (511 aa)
	A0A316YRB6	SYF2-domain-containing protein. (360 aa)
	A0A316YRB7	Uncharacterized protein. (931 aa)
	A0A316YRI5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (194 aa)
	A0A316YRP0	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (724 aa)
	A0A316YS09	Uncharacterized protein. (835 aa)
	A0A316YSN3	Uncharacterized protein. (387 aa)
	A0A316YTS4	PRP1_N domain-containing protein. (970 aa)
	A0A316YU42	P-loop containing nucleoside triphosphate hydrolase protein. (1198 aa)
	A0A316YU62	Isy1-domain-containing protein. (349 aa)
	A0A316YUA4	Uncharacterized protein. (540 aa)
	A0A316YUG0	L domain-like protein. (263 aa)
	A0A316YUZ6	Nop domain-containing protein. (609 aa)
	A0A316YVP9	Cyclophilin-like protein. (554 aa)
	A0A316YVQ7	RNA-binding domain-containing protein. (332 aa)
	A0A316YW81	P-loop containing nucleoside triphosphate hydrolase protein. (1032 aa)
	A0A316YW83	DUF382-domain-containing protein. (610 aa)
	A0A316YWZ0	Nuclear cap-binding protein subunit 2. (257 aa)
	A0A316YWZ3	PRP3-domain-containing protein. (618 aa)
	A0A316YWZ9	Small nuclear ribonucleoprotein Sm D2. (111 aa)
	A0A316YXQ1	Matrin-type domain-containing protein. (246 aa)
	FA10DRAFT_490	SKIP_SNW domain-containing protein. (595 aa)
	A0A316YXU6	Putative PRP19-non-snRNP spliceosome component required for DNA repair. (548 aa)
	A0A316YXU9	Sm-like ribonucleo protein. (203 aa)
	A0A316YYH9	RNA-binding domain-containing protein. (315 aa)
	A0A316YYI8	Putative PRP8-U5 snRNP protein, pre-mRNA splicing factor. (2369 aa)
	A0A316YYJ6	Uncharacterized protein. (871 aa)
	A0A316YZB3	DUF1716-domain-containing protein. (690 aa)
	A0A316Z0A2	Putative U5 snRNP-specific 40 kd protein. (379 aa)
	A0A316Z1K9	Putative small nuclear ribonucleo protein F. (91 aa)

Your Current Organism:

Acaromyces ingoldii

NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A316YB69	A0A316YCY1	A0A316YB69	A0A316YCY1	RNA-binding domain-containing protein.	Uncharacterized protein.	0.549
A0A316YB69	A0A316YDN0	A0A316YB69	A0A316YDN0	RNA-binding domain-containing protein.	Uncharacterized protein.	0.549
A0A316YB69	A0A316YFA2	A0A316YB69	A0A316YFA2	RNA-binding domain-containing protein.	Cwf21-domain-containing protein.	0.467
A0A316YB69	A0A316YFX6	A0A316YB69	A0A316YFX6	RNA-binding domain-containing protein.	Putative ATP dependent RNA helicase.	0.561
A0A316YB69	A0A316YG73	A0A316YB69	A0A316YG73	RNA-binding domain-containing protein.	SMAD/FHA domain-containing protein.	0.659
A0A316YB69	A0A316YG91	A0A316YB69	A0A316YG91	RNA-binding domain-containing protein.	Uncharacterized protein.	0.622
A0A316YB69	A0A316YIB2	A0A316YB69	A0A316YIB2	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.603
A0A316YB69	A0A316YIB8	A0A316YB69	A0A316YIB8	RNA-binding domain-containing protein.	WD40 repeat-like protein.	0.549
A0A316YB69	A0A316YIK5	A0A316YB69	A0A316YIK5	RNA-binding domain-containing protein.	Splicing factor 3B subunit 5/RDS3 complex subunit 10.	0.999
A0A316YB69	A0A316YIV6	A0A316YB69	A0A316YIV6	RNA-binding domain-containing protein.	Pre-mRNA splicing factor.	0.599
A0A316YB69	A0A316YJ68	A0A316YB69	A0A316YJ68	RNA-binding domain-containing protein.	Small nuclear ribonucleoprotein G.	0.970
A0A316YB69	A0A316YJA7	A0A316YB69	A0A316YJA7	RNA-binding domain-containing protein.	G10 protein.	0.584
A0A316YB69	A0A316YJS1	A0A316YB69	A0A316YJS1	RNA-binding domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.621
A0A316YB69	A0A316YJV4	A0A316YB69	A0A316YJV4	RNA-binding domain-containing protein.	TPR_REGION domain-containing protein.	0.572
A0A316YB69	A0A316YKA5	A0A316YB69	A0A316YKA5	RNA-binding domain-containing protein.	Uncharacterized protein.	0.934
A0A316YB69	A0A316YL74	A0A316YB69	A0A316YL74	RNA-binding domain-containing protein.	Putative ribosomal elongation factor EF-2.	0.700
A0A316YB69	A0A316YM92	A0A316YB69	A0A316YM92	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.598
A0A316YB69	A0A316YMB8	A0A316YB69	A0A316YMB8	RNA-binding domain-containing protein.	Uncharacterized protein.	0.922
A0A316YB69	A0A316YMH5	A0A316YB69	A0A316YMH5	RNA-binding domain-containing protein.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.467
A0A316YB69	A0A316YN63	A0A316YB69	A0A316YN63	RNA-binding domain-containing protein.	RNA-binding domain-containing protein.	0.549