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A0A316YG91 A0A316YG91 A0A316YJ68 A0A316YJ68 A0A316YM92 A0A316YM92 A0A316YP88 A0A316YP88 A0A316YPD8 A0A316YPD8 A0A316YQH7 A0A316YQH7 A0A316YRI5 A0A316YRI5 A0A316YWZ0 A0A316YWZ0 A0A316YWZ9 A0A316YWZ9 A0A316YXU9 A0A316YXU9 A0A316Z1K9 A0A316Z1K9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A316YG91Uncharacterized protein. (987 aa)
A0A316YJ68Small nuclear ribonucleoprotein G. (94 aa)
A0A316YM92RNA-binding domain-containing protein. (361 aa)
A0A316YP88Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A316YPD8Small nuclear ribonucleoprotein Sm D3. (115 aa)
A0A316YQH7Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (120 aa)
A0A316YRI5U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (194 aa)
A0A316YWZ0Nuclear cap-binding protein subunit 2. (257 aa)
A0A316YWZ9Small nuclear ribonucleoprotein Sm D2. (111 aa)
A0A316YXU9Sm-like ribonucleo protein. (203 aa)
A0A316Z1K9Putative small nuclear ribonucleo protein F. (91 aa)
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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