22 items (Acaromyces ingoldii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316YBG1	Uncharacterized protein. (321 aa)
	A0A316YD16	Putative ATP-dependent RNA helicase. (433 aa)
	A0A316YET9	Putative mago nashi protein. (148 aa)
	A0A316YFB3	RRM domain-containing protein. (366 aa)
	A0A316YGU9	Uncharacterized protein. (125 aa)
	A0A316YHB4	ABM domain-containing protein. (95 aa)
	A0A316YII7	WD40 repeat-like protein. (447 aa)
	A0A316YKD6	Pinin_SDK_memA domain-containing protein. (241 aa)
	A0A316YKV3	NTF2-like protein. (662 aa)
	A0A316YL65	Uncharacterized protein. (448 aa)
	A0A316YM14	Uncharacterized protein. (318 aa)
	A0A316YNI4	SAP domain-containing protein. (287 aa)
	A0A316YPQ3	PWI domain-containing protein. (514 aa)
	A0A316YPW1	Uncharacterized protein. (241 aa)
	A0A316YRC5	RRM domain-containing protein. (236 aa)
	A0A316YRT5	RNA-binding domain-containing protein. (203 aa)
	A0A316YRY7	Uncharacterized protein. (864 aa)
	A0A316YS42	RNA-binding domain-containing protein. (287 aa)
	A0A316YU00	G-patch domain-containing protein. (450 aa)
	A0A316YU89	Uncharacterized protein. (560 aa)
	A0A316YXA8	DEAD-domain-containing protein. (396 aa)
	A0A316Z2B6	RNA-binding domain-containing protein. (201 aa)

Your Current Organism:

Acaromyces ingoldii

NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316YBG1	A0A316YD16	Uncharacterized protein.	Putative ATP-dependent RNA helicase.	0.665
A0A316YBG1	A0A316YET9	Uncharacterized protein.	Putative mago nashi protein.	0.870
A0A316YBG1	A0A316YFB3	Uncharacterized protein.	RRM domain-containing protein.	0.573
A0A316YBG1	A0A316YKD6	Uncharacterized protein.	Pinin_SDK_memA domain-containing protein.	0.994
A0A316YBG1	A0A316YM14	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A316YBG1	A0A316YPQ3	Uncharacterized protein.	PWI domain-containing protein.	0.679
A0A316YBG1	A0A316YRC5	Uncharacterized protein.	RRM domain-containing protein.	0.818
A0A316YBG1	A0A316YRT5	Uncharacterized protein.	RNA-binding domain-containing protein.	0.856
A0A316YBG1	A0A316YS42	Uncharacterized protein.	RNA-binding domain-containing protein.	0.818
A0A316YBG1	A0A316YU89	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A316YBG1	A0A316YXA8	Uncharacterized protein.	DEAD-domain-containing protein.	0.849
A0A316YBG1	A0A316Z2B6	Uncharacterized protein.	RNA-binding domain-containing protein.	0.968
A0A316YD16	A0A316YBG1	Putative ATP-dependent RNA helicase.	Uncharacterized protein.	0.665
A0A316YD16	A0A316YET9	Putative ATP-dependent RNA helicase.	Putative mago nashi protein.	0.919
A0A316YD16	A0A316YFB3	Putative ATP-dependent RNA helicase.	RRM domain-containing protein.	0.920
A0A316YD16	A0A316YGU9	Putative ATP-dependent RNA helicase.	Uncharacterized protein.	0.720
A0A316YD16	A0A316YHB4	Putative ATP-dependent RNA helicase.	ABM domain-containing protein.	0.932
A0A316YD16	A0A316YII7	Putative ATP-dependent RNA helicase.	WD40 repeat-like protein.	0.929
A0A316YD16	A0A316YKD6	Putative ATP-dependent RNA helicase.	Pinin_SDK_memA domain-containing protein.	0.724
A0A316YD16	A0A316YKV3	Putative ATP-dependent RNA helicase.	NTF2-like protein.	0.842