12 items (Acaromyces ingoldii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316YFB3	RRM domain-containing protein. (366 aa)
	A0A316YGU9	Uncharacterized protein. (125 aa)
	A0A316YHB4	ABM domain-containing protein. (95 aa)
	A0A316YII7	WD40 repeat-like protein. (447 aa)
	A0A316YKV3	NTF2-like protein. (662 aa)
	A0A316YL65	Uncharacterized protein. (448 aa)
	A0A316YM14	Uncharacterized protein. (318 aa)
	A0A316YNI4	SAP domain-containing protein. (287 aa)
	A0A316YPW1	Uncharacterized protein. (241 aa)
	A0A316YRY7	Uncharacterized protein. (864 aa)
	A0A316YS42	RNA-binding domain-containing protein. (287 aa)
	A0A316YU00	G-patch domain-containing protein. (450 aa)

Your Current Organism:

Acaromyces ingoldii

NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316YFB3	A0A316YGU9	RRM domain-containing protein.	Uncharacterized protein.	0.581
A0A316YFB3	A0A316YHB4	RRM domain-containing protein.	ABM domain-containing protein.	0.743
A0A316YFB3	A0A316YII7	RRM domain-containing protein.	WD40 repeat-like protein.	0.764
A0A316YFB3	A0A316YKV3	RRM domain-containing protein.	NTF2-like protein.	0.889
A0A316YFB3	A0A316YL65	RRM domain-containing protein.	Uncharacterized protein.	0.791
A0A316YFB3	A0A316YM14	RRM domain-containing protein.	Uncharacterized protein.	0.755
A0A316YFB3	A0A316YNI4	RRM domain-containing protein.	SAP domain-containing protein.	0.743
A0A316YFB3	A0A316YPW1	RRM domain-containing protein.	Uncharacterized protein.	0.777
A0A316YFB3	A0A316YRY7	RRM domain-containing protein.	Uncharacterized protein.	0.772
A0A316YFB3	A0A316YU00	RRM domain-containing protein.	G-patch domain-containing protein.	0.791
A0A316YGU9	A0A316YFB3	Uncharacterized protein.	RRM domain-containing protein.	0.581
A0A316YGU9	A0A316YHB4	Uncharacterized protein.	ABM domain-containing protein.	0.462
A0A316YGU9	A0A316YII7	Uncharacterized protein.	WD40 repeat-like protein.	0.684
A0A316YGU9	A0A316YKV3	Uncharacterized protein.	NTF2-like protein.	0.999
A0A316YGU9	A0A316YL65	Uncharacterized protein.	Uncharacterized protein.	0.500
A0A316YGU9	A0A316YM14	Uncharacterized protein.	Uncharacterized protein.	0.660
A0A316YGU9	A0A316YNI4	Uncharacterized protein.	SAP domain-containing protein.	0.462
A0A316YGU9	A0A316YPW1	Uncharacterized protein.	Uncharacterized protein.	0.712
A0A316YGU9	A0A316YRY7	Uncharacterized protein.	Uncharacterized protein.	0.675
A0A316YGU9	A0A316YS42	Uncharacterized protein.	RNA-binding domain-containing protein.	0.639